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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.MQD5S | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 289aa MW: 33148.2 Da PI: 5.8422 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 133.3 | 1.7e-41 | 7 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 lp+G+rF+Pt+eel+ +yL++k g++ e++++i++vd+++++PwdLp + kvk++++ew+fF + ky ++kr nr+t+ gyWk tgk++ ++++ Araip.MQD5S 7 LPVGYRFRPTEEELLIHYLNNKHLGNDAEIKNTISQVDLCNFDPWDLPeQsKVKSDDQEWFFFNEL--KYMKNKRCNRKTNMGYWKITGKERIIKRTg 102 799***************************999**************95258899999*****886..778899******************999986 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+k+tLvfy ++p+ +kt+Wv+hey++ Araip.MQD5S 103 TDSVIGTKRTLVFY--KRPHNVKTNWVLHEYHA 133 6778**********..788889*********95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.12E-42 | 4 | 152 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 42.768 | 7 | 153 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.1E-23 | 8 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence Send to blast |
MAETRVLPVG YRFRPTEEEL LIHYLNNKHL GNDAEIKNTI SQVDLCNFDP WDLPEQSKVK 60 SDDQEWFFFN ELKYMKNKRC NRKTNMGYWK ITGKERIIKR TGTDSVIGTK RTLVFYKRPH 120 NVKTNWVLHE YHALHQKVGS CQSNIVLSRV TMNAEKREKK LKTKASNIIE EEVKCEDEPC 180 SEITGCVTQA TTEDAILPDN ACVSSEWQQP QAMDYEILSS GQRSSVAYSG NENNAALLPM 240 EATWRQDAGM NTECFWNSLF SSIDADPHAE FLNSVLAGDD QLYVDSGHH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-29 | 7 | 150 | 17 | 162 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-29 | 7 | 150 | 17 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-29 | 7 | 150 | 17 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-29 | 7 | 150 | 17 | 162 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-29 | 7 | 150 | 20 | 165 | NAC domain-containing protein 19 |
3swm_B | 3e-29 | 7 | 150 | 20 | 165 | NAC domain-containing protein 19 |
3swm_C | 3e-29 | 7 | 150 | 20 | 165 | NAC domain-containing protein 19 |
3swm_D | 3e-29 | 7 | 150 | 20 | 165 | NAC domain-containing protein 19 |
3swp_A | 3e-29 | 7 | 150 | 20 | 165 | NAC domain-containing protein 19 |
3swp_B | 3e-29 | 7 | 150 | 20 | 165 | NAC domain-containing protein 19 |
3swp_C | 3e-29 | 7 | 150 | 20 | 165 | NAC domain-containing protein 19 |
3swp_D | 3e-29 | 7 | 150 | 20 | 165 | NAC domain-containing protein 19 |
4dul_A | 3e-29 | 7 | 150 | 17 | 162 | NAC domain-containing protein 19 |
4dul_B | 3e-29 | 7 | 150 | 17 | 162 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000250|UniProtKB:Q949N0}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.MQD5S |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By cold, heat and drought stresses. {ECO:0000269|PubMed:17158162}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016185093.1 | 0.0 | NAC domain-containing protein 14-like | ||||
Refseq | XP_025631883.1 | 0.0 | NAC domain-containing protein 14-like isoform X1 | ||||
Swissprot | B5X570 | 4e-39 | NAC14_ARATH; NAC domain-containing protein 14 | ||||
TrEMBL | A0A445ACS4 | 0.0 | A0A445ACS4_ARAHY; Uncharacterized protein | ||||
STRING | AES84627 | 8e-50 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2065 | 25 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 2e-41 | NAC 014 |