PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.MFA9A
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 526aa    MW: 58120.5 Da    PI: 7.3307
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.MFA9AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94e-1777121147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+eE+e++++a k++G g W+ I +++g ++t+ q++s+ qk+
      Araip.MFA9A  77 REKWTEEEHEKFLEALKLYGRG-WRQIEEHIG-TKTAVQIRSHAQKF 121
                      789*******************.*********.************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.81E-1671124IPR009057Homeodomain-like
PROSITE profilePS5129421.58472126IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.3E-1074123IPR009057Homeodomain-like
TIGRFAMsTIGR015574.3E-1675124IPR006447Myb domain, plants
SMARTSM007173.6E-1376124IPR001005SANT/Myb domain
PfamPF002491.4E-1477120IPR001005SANT/Myb domain
CDDcd001672.21E-1179122No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0046686Biological Processresponse to cadmium ion
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    Send to blast
WLVGLVPVKL RVFTRTGSDF APMEMQDQIE GTKLSKSGTA SDFHSNDGSQ SQSPDISSVG  60
NNHAPKVRKP YTITKQREKW TEEEHEKFLE ALKLYGRGWR QIEEHIGTKT AVQIRSHAQK  120
FFSKVIVVKF QFITVFKSLV VLDGKNFDHL QLMIVVRESD GSAESSIHPI DIPPPRPKRK  180
PLHPYPRKLA NSFKRHSRPN EPEKSPSPNL SSAEKDSQSP TSVLSAFGSE AFGSAFSEHT  240
NRCLSPNSCT TDIQSINLSP IEKENDCMTS KPSKEEDKTP LASAALSISS QPYLHMKSEK  300
LELCSKQTKC INNDVVNVLP TTIKLFGRTV SMVGNQESIN TEEECVKLCT TRSDEVDDVE  360
NQLNTQLSLG MCNGSWRVMP KEAIVTGAEH PKEDLGLGES APEASLAWSS LFPGGPAAYF  420
GSSNTVVNPM PLHPSLKVRA REEEGSCTGS NGESVNDVEI QGKIQGRSLD TVDSRCQQTS  480
HQEEVVVPQK SPRGFVPYKR CLAERDASSL IVALEERKGQ RARVCS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00146DAPTransfer from AT1G18330Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.MFA9A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016203329.10.0protein REVEILLE 7 isoform X1
RefseqXP_025655481.10.0protein REVEILLE 7 isoform X1
RefseqXP_029149066.10.0protein REVEILLE 7 isoform X1
TrEMBLA0A444Z1T20.0A0A444Z1T2_ARAHY; Uncharacterized protein
STRINGGLYMA16G34340.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF73133244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18330.29e-53MYB_related family protein