PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.M4TVL | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 323aa MW: 36670.2 Da PI: 6.4003 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.1 | 2.4e-11 | 140 | 191 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rr++h ++Er+RR+++N+ ++ L++l+ ++ + ++ + a+i A++++k+L+ Araip.M4TVL 140 RRMTHIAVERNRRRQMNEHLSVLKSLMHPS---YIQRGDHASIIGGAIDFVKELE 191 8****************************9...9******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 3.2E-12 | 138 | 195 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.93E-15 | 138 | 207 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.36E-10 | 139 | 195 | No hit | No description |
PROSITE profile | PS50888 | 14.526 | 139 | 190 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.0E-8 | 140 | 191 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.0E-7 | 145 | 196 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence Send to blast |
MERLQLQGPL DSSLFGEHLE VNCLEQGFVD RESNFKVKED EHEEQTLISS LEGNMPFLQM 60 LQSVESPPFS PFKDPNFQAL LRPQHLKKPW EGTPYIPTLE SEINEFEQYT RSGSDAAWAN 120 KKTNSQHKDT RLSKHHHQER RMTHIAVERN RRRQMNEHLS VLKSLMHPSY IQRGDHASII 180 GGAIDFVKEL EQLVETLEAQ RRMRNKEEED GGMRSSASSS RKEEASGGNE AKAERRSKVG 240 GIEVSVIQSH VNLRIQCEKR AGLLINAIVA LENLRLPILH LNITSSDSSV LYSFSLKIEE 300 DSKLGSANEI AEAVDKILTS LTH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 140 | 151 | RMTHIAVERNRR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.M4TVL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020959872.1 | 0.0 | transcription factor bHLH70 | ||||
Swissprot | O81037 | 2e-68 | BH070_ARATH; Transcription factor bHLH70 | ||||
TrEMBL | A0A445CPN2 | 0.0 | A0A445CPN2_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA07G05500.1 | 1e-111 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6894 | 34 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46810.1 | 7e-62 | bHLH family protein |
Publications ? help Back to Top | |||
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