PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.LP6IV
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 272aa    MW: 31041.7 Da    PI: 7.0335
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.LP6IVgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-1095144455
                  HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  +h e+E++RR+++     + r+llP       ++K s ++   + v+YIk+Lq
  Araip.LP6IV  95 MHREIEKQRRQEMSRLCTTFRTLLPFeY---IKGKRSTSDHMHEGVKYIKHLQ 144
                  7*************************77...*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.26E-1388162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.19E-1089148No hitNo description
Gene3DG3DSA:4.10.280.108.6E-1089162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.60891143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-795144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MNPWNPCDDL YFQISSSSAD YDYSSLPIIQ TSPSAAEDHH HHQILVHGYE YDPAMMDASA  60
SVPPCPNQKG KQRKELTPNN NALGAEDGDE NKKWMHREIE KQRRQEMSRL CTTFRTLLPF  120
EYIKGKRSTS DHMHEGVKYI KHLQNRVEKL QAKRDELVKS INLRPNKSGS SSSSSSTQHV  180
HHQTFVIVEP FSGGVLIKCS YSFRNYAFPL SGILDIVLRQ GLNVVDCTSI TTDDHRFIHT  240
IRSEDPQVMT TETDDYTELQ RKLKEAISSS SN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.LP6IV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177463.10.0transcription factor bHLH118-like
RefseqXP_025677067.10.0transcription factor bHLH118-like
TrEMBLA0A444XX440.0A0A444XX44_ARAHY; Uncharacterized protein
STRINGGLYMA10G38620.24e-83(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.13e-26bHLH family protein