PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.L2MXT
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 401aa    MW: 43601.4 Da    PI: 6.1942
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.L2MXTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.9e-10239287355
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Araip.L2MXT 239 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 287
                  58**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.23E-17234304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.01E-11234291No hitNo description
PROSITE profilePS5088815.485236286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-16237304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-7239287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-10242292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MGGHENAMGF HHGNESILTN NVNVSEMDMS SSMSLAKSSS SDVVVPNRSS MVTTHNSDFG  60
NSSSYPFVQY MSDSTNLEGI MVHKIPSFGS GNFSEIVGSF CQEGSSDIPN MGFRPSYNHG  120
NDAGTERAPM NEQSQVEDSI TEDGAPGTAP SGNRRKRMLD HDSSFSPNKN AGGDELKDSP  180
RTISDGAKEH EKKAKVEQNV SADLRGKQPA KQSKENSPSG EAPKENFIHV RARRGQATNS  240
HSLAERVRRE KISERMRLLQ ELVPGCNKIT GKAVMLDEII NYVQSLQQQV EFLSMKLATV  300
NPELNFDVER ILSKEILQSR LGHGIVGYGV GMSSPHPFSN GSFQGNMAGM PSTSTQFPPL  360
PQGVLDHEFQ SLYGMGYDPN TALDNLGPNV SCLSGRLKTE L
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00135DAPTransfer from AT1G10120Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.L2MXT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016162972.10.0transcription factor bHLH74 isoform X1
RefseqXP_025660178.10.0transcription factor bHLH74 isoform X1
TrEMBLA0A445CXF40.0A0A445CXF4_ARAHY; Uncharacterized protein
STRINGXP_007160954.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75853345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.19e-77bHLH family protein