|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Araip.L12RP |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
Family |
TALE |
Protein Properties |
Length: 357aa MW: 40565.7 Da PI: 6.1885 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Araip.L12RP | genome | NCGR_PGC | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 29.4 | 1.4e-09 | 282 | 319 | 18 | 55 |
HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55
+k +yps++++ LA+++gL+++q+ +WF N+R ++
Araip.L12RP 282 RHHKWPYPSESQKVALAESTGLDQKQINNWFINQRKRH 319
445679*****************************885 PP
|
2 | ELK | 41.1 | 3.6e-14 | 239 | 260 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK qLlrKYsgyLgsLkqEF+
Araip.L12RP 239 ELKGQLLRKYSGYLGSLKQEFM 260
9********************8 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009934 | Biological Process | regulation of meristem structural organization |
GO:0048440 | Biological Process | carpel development |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MEEEGNGTYS MMAFGENIMS TSNNSGIYPI IMMPLLTTPV INPLPNLNYS NPNNTSNDNA 60 DTNSSFPLPM LTTHQEPIRN NTGICYFMDI HNNHHGSSSS SSSALKAKIM SHPHYHRLLA 120 AYVNCQKVGA PPEVVARLEE ACESAAAMAA TSCIGEDPAL DQFMEAYCEM LIKYEQELSK 180 PFKESMLFLQ RMESQFKSLS ISPSNNFAGN EGVDRNGSSE DDVDLQNNAI IDPQAEDREL 240 KGQLLRKYSG YLGSLKQEFM KKRKKGKLPK EARQQLLEWW SRHHKWPYPS ESQKVALAES 300 TGLDQKQINN WFINQRKRHW KPSEDMQFVV MDQSHPHYYI DNVVANPFPM DFSHTML
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 254 | 263 | LKQEFMKKRK |
2 | 260 | 264 | KKRKK |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Possible transcription activator involved in early embryonic development. Probably binds to the DNA sequence 5'-TGAC-3'. |