PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.KXH96
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 345aa    MW: 38343.8 Da    PI: 6.6012
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.KXH96genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.14.9e-30134195159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+edp+++eitY+g+H+++
  Araip.KXH96 134 LDDGYSWRKYGQKDILGATYPRGYYRCTHRnvqGCLATKQVQRSDEDPNMFEITYRGSHTCT 195
                  59***************************98999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.686129197IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.6E-29131196IPR003657WRKY domain
SuperFamilySSF1182901.19E-26133196IPR003657WRKY domain
SMARTSM007745.4E-42134196IPR003657WRKY domain
PfamPF031061.6E-27135194IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MEKMMMMGLG ETKKLREELV QGLELARQLQ IHLHVASTPH ETRDLLIQNI ISAFENALHI  60
LRWTPPPAAV DPSISPAIRM SQESPPLSTG SPRSEDSDRD LRDHDPNASK KRKSLPRWTK  120
QIRVGPGMGV EGPLDDGYSW RKYGQKDILG ATYPRGYYRC THRNVQGCLA TKQVQRSDED  180
PNMFEITYRG SHTCTMASSS SNSASLPAPT TSPRNPNNNV LQSLDQQPPM MNELLLNLRA  240
GLRVQTENLD NCSSFNFPSN SNHVFSSQTP PPQPQPMLGD NNFPSYMSPA TSGISQFSMS  300
SGNQINDMIS ASNSNSPTVG LDFSFDQFDL DGHNNFTFGN PQFFP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-20134194868OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.KXH96
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016165592.10.0probable WRKY transcription factor 53
RefseqXP_025668377.10.0probable WRKY transcription factor 53
TrEMBLA0A445BSJ30.0A0A445BSJ3_ARAHY; Uncharacterized protein
STRINGGLYMA06G13090.11e-129(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.13e-49WRKY family protein