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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.KL8NJ | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ERF | ||||||||
Protein Properties | Length: 379aa MW: 41689 Da PI: 6.9746 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.9 | 7.7e-21 | 158 | 207 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g Araip.KL8NJ 158 KYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 207 8********.**********7.....337*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 3.4E-33 | 157 | 216 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.0E-14 | 158 | 207 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.85E-23 | 158 | 216 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 7.96E-22 | 158 | 217 | No hit | No description |
PROSITE profile | PS51032 | 25.686 | 158 | 215 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.6E-39 | 158 | 221 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.6E-12 | 159 | 170 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.6E-12 | 181 | 197 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence Send to blast |
MHGGRSLEGI IIINEREILV TLAKVAGSDE FRKLKAVEDE EGGGSSSSQG CSSIVSELEQ 60 LVSGTHANPQ EQWWGHEQQQ SSMMHQQHHH DDDVSASVLW GGHKRGRQEE TNIQTAGTSS 120 HNQLLQHVTT LHASQPSAGT TSSESGTSYE ETGERKRKYR GVRQRPWGKW AAEIRDPHKA 180 ARVWLGTFDT AEAAARAYDE AALRFRGNRA KLNFPENVKA VPVPPQQTTV LQASPVPVFR 240 PVMQGPRPPL QVSPEQMMND YLQYSELLKS SGDHFHGQWL YRSQMNLADQ TSLLLSTSSG 300 SSSLSFSSSL PAEFSPSTSQ SSSASFPLLF SSVQQQPGHQ PGFFRPPRYY SDNIRGASGG 360 LSFPPPSTWS DTHGYPPPN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 2e-23 | 157 | 218 | 1 | 63 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.KL8NJ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016174101.1 | 0.0 | ethylene-responsive transcription factor ERF112 | ||||
Refseq | XP_025679440.1 | 0.0 | ethylene-responsive transcription factor ERF112 | ||||
TrEMBL | A0A444XUE2 | 0.0 | A0A444XUE2_ARAHY; Uncharacterized protein | ||||
STRING | XP_004496448.1 | 4e-42 | (Cicer arietinum) | ||||
STRING | XP_007151985.1 | 7e-42 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4919 | 32 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 3e-22 | ethylene response factor 110 |