PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.K6RXL
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 652aa    MW: 73114.8 Da    PI: 10.418
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.K6RXLgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.92.5e-15510556455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   hn+ ErrRRdriN+++  L++l+P+a      K +Ka++L ++++Y+k+Lq
  Araip.K6RXL 510 VHNQSERRRRDRINQKMKALQRLVPNA-----NKTDKASMLDEVIKYLKQLQ 556
                  5*************************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF037634.6E-12200280IPR005516Remorin, C-terminal
SuperFamilySSF474591.44E-17504568IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.276506555IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.1E-17510564IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.4E-13510556IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.75E-14511560No hitNo description
SMARTSM003533.1E-16512561IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 652 aa     Download sequence    Send to blast
MGPFGPFWTS FSWALLGQYT SILNSEIKAV ERDIIPFQLH PQCIKGCVQR HQISPCFSPF  60
PVQLYQYTLI VTSSSSIHSD FRSKPNVQVF VDKSEFRNDD KHVTAVAAAA FSIHSIEQAA  120
AANLISRPQS MRRKNHSTLS ERPTYGGDTS VKRSSFGEDG RRKEGSVPLR GSSDDISSKR  180
TVPQTQGHQK QIGIPIQHNN KANAEAWEKA KEKKIHAKMH MEKKKNELEK RRIVTTQHYN  240
NKIASIDKVA QGALTQLEDK RRKELSRATE KANKIRKTGK GSLYPILFER TSRHHKANNY  300
DEIAELTWEN GQISMHGLSG LDPTSQKKPI WVNRAHDTLE SIVQQATCNN KKSKLTIKDN  360
HAYVDVPTTT SSIVASSGEH HQMVPTLSRK RSHSSYSDQQ QHRRDVNYVS INNTKKMLLE  420
DHNTNNRKCG VATASVTFCK DNNDITTMMT CPSLDSGPRS FKNDKILEED SACQSGSEVR  480
NNENDRDGGK GETGQSKSSS VVRRNRTAAV HNQSERRRRD RINQKMKALQ RLVPNANKTD  540
KASMLDEVIK YLKQLQAQIE MMMSVSMPQM IMQQQLQMSM LARSMANNAP NPIRPLFPQL  600
IQPTTTIGAA NTASAPMFLA PSLMMPSSTN ASFPLPSASY GTPTFAQIRP ST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1514519ERRRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.K6RXL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016181970.10.0transcription factor PIF7 isoform X1
RefseqXP_020970527.10.0transcription factor PIF7 isoform X4
RefseqXP_025681416.10.0transcription factor PIF7 isoform X1
TrEMBLA0A444WWP70.0A0A444WWP7_ARAHY; Uncharacterized protein
STRINGGLYMA06G21495.13e-91(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF129992432
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.17e-32bHLH family protein