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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.K6CZL | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 329aa MW: 37289.3 Da PI: 7.1114 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.3 | 1.2e-12 | 124 | 167 | 8 | 55 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er RR+++++ f++L +lP++ +K +K++i+ +Av++Ik Lq Araip.K6CZL 124 TERERRKKMRDMFANLHAMLPQL----PPKADKSSIVDEAVRHIKTLQ 167 6*********************6....39******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.535 | 116 | 166 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 5.1E-15 | 119 | 187 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.9E-14 | 121 | 182 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.08E-12 | 121 | 171 | No hit | No description |
Pfam | PF00010 | 4.9E-10 | 124 | 167 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.1E-8 | 124 | 172 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009793 | Biological Process | embryo development ending in seed dormancy | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence Send to blast |
KFLTITLSLS PPTHIDTLSS LSLTMAMSVE NQDPNDIGFF WDNQPWDVSN FDNLGQRETK 60 ENLHIEMPPL PPAPTNHLTQ GEIEKKNEEL TMPVTSNKKR RRADEDGKRP MKNDGNDHDL 120 HIWTERERRK KMRDMFANLH AMLPQLPPKA DKSSIVDEAV RHIKTLQQTV ENLEKKKRQR 180 IQSLSVSVSP IACESAVTNP QWNPYDSSSL SRDNNALTIT ATQHVSAAVA NNSPFFKTWA 240 SQNVVLNMCG EEAQFSICAE KKPSLFTTIA FVLQKHKVDV ISASILCNHN VNRYMVLTHA 300 SRALLQFADA NTVEETFKRA AEEIMMWLG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 174 | 179 | KKKRQR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.K6CZL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016178303.1 | 0.0 | transcription factor bHLH95 | ||||
Refseq | XP_025682647.1 | 0.0 | transcription factor bHLH95 | ||||
TrEMBL | A0A444X3M8 | 0.0 | A0A444X3M8_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4773 | 33 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 2e-48 | bHLH family protein |