PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.K4M50
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 59aa    MW: 7104.37 Da    PI: 10.5274
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.K4M50genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.43.5e-057382255
                 HHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH 22 eLrellPk.askapskKlsKaeiLekAveYIksLq 55
                 + r+llP       ++K s ++   + v+YIk+Lq
  Araip.K4M50  7 TFRTLLPFeY---IKGKRSTSDHMHEGVKYIKHLQ 38
                 6799****77...9********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.49E-7353IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-51955IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 59 aa     Download sequence    Send to blast
MSRLCTTFRT LLPFEYIKGK RSTSDHMHEG VKYIKHLQNR VEKLQAKRDE LVKLIKQPY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.K4M50
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015941452.18e-32transcription factor bHLH118
RefseqXP_025620201.18e-32transcription factor bHLH118
TrEMBLA0A445BFU22e-30A0A445BFU2_ARAHY; Uncharacterized protein
STRINGGLYMA10G38620.23e-21(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.12e-15bHLH family protein