PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.K1BY2

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Protein Properties

Length: 304aa MW: 35272.2 Da PI: 6.9428

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.K1BY2	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	30.9	4.6e-10	203	300	3	98
EE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 k+l psd ++s rl++p +fa e+ g+ + + ++ +++g ++ ++ +++ + ++ GW++F+ka+ Lk +D + F+ + +++ +++v Araip.K1BY2 203 KELQPSDIGAS-RLYVPVDFA-EIlktFGDAAIWTIISPPSPQGSTFLFQG--HQNPTNpfdIRFGLGWQDFCKAHVLKPKDLLAFRIVCKRNLRMMV 296 77878888887.5******.5669966778888899999******..55555555799*******************99999999* PP EEE- CS B3 95 kvfr 98 ++r Araip.K1BY2 297 DIRR 300 9998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101936	5.89E-10	200	300	IPR015300	DNA-binding pseudobarrel domain
Gene3D	G3DSA:2.40.330.10	6.1E-9	200	298	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	4.70E-7	201	300	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence Send to blast
MAISASRSDI NRRFMATMNS WPSDDDRLIK FRLVKVKGKR HFPKHFLARY GKEFGNTCFA 60 IDHCDNCLKI QLVGNHMNRV IEEDTFETIR AFYQAERDVT VKLWYVGFGL FYLSLWDKMN 120 FELALTQNPN FYVRDQLTSD KLDEIELNLN LKYVQKDEQP QVTSSSGDSP QSTDVEEVVG 180 PNTADPVEID NHMRDIIFHT YSKELQPSDI GASRLYVPVD FAEILKTFGD AAIWTIISPP 240 SPQGSTFLFQ GHQNPTNPFD IRFGLGWQDF CKAHVLKPKD LLAFRIVCKR NLRMMVDIRR 300 YPRE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.K1BY2

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016169463.1	0.0	uncharacterized protein LOC107612157
Refseq	XP_025603129.1	0.0	uncharacterized protein LOC112695131
Refseq	XP_025603130.1	0.0	uncharacterized protein LOC112695131
Refseq	XP_025630253.1	0.0	uncharacterized protein LOC112723205
Refseq	XP_025630254.1	0.0	uncharacterized protein LOC112723205
Refseq	XP_025669204.1	0.0	uncharacterized protein LOC112769027
Refseq	XP_025669205.1	0.0	uncharacterized protein LOC112769027
Refseq	XP_025669206.1	0.0	uncharacterized protein LOC112769028
Refseq	XP_025669207.1	0.0	uncharacterized protein LOC112769028