PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.K0PT4
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 452aa    MW: 52864.2 Da    PI: 8.6217
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.K0PT4genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR153.21e-1627112190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  kfY++Y+k +GFs++++++++    ++i+++  vCs+eg+ +++ +    + +t+++   +C a++ v+ +k  g w ++k++l+H+H+++
  Araip.K0PT4  27 KFYKHYSKLAGFSTKIRNTTRD--REKIKNQLIVCSREGRWKSKISP---TLNTNPSAGLNCPARIYVHIMKdVGLWTISKVVLNHSHPCC 112
                  6****************98887..66799***********9998776...99*******************999**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.6E-1427112IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MQTSCVVDEK FVPKVGMIFK TLEEARKFYK HYSKLAGFST KIRNTTRDRE KIKNQLIVCS  60
REGRWKSKIS PTLNTNPSAG LNCPARIYVH IMKDVGLWTI SKVVLNHSHP CCLDQPEMLK  120
QHRELSMFVR RTIETYEEAR IRPSKTYQSF VAAAGSHPCT IFGSPDLMGS VWFAELYEDW  180
HIWIPVYLDH HFWAGMRSTQ RSESMHSFFN KFITWNISLR QFLNQYDNCL ASKEQEEREF  240
HAADFHTVIL CAKKLAIEAQ LQHVYTHEKF REVQAQFRGK VNCITRSIHS TLGFTTYEVI  300
EQVSNSTFNK FVVTYDAVSR DVKCHWFLFE SRGIFCRHSL SVLSFERVDN VAPKYILECW  360
SKNIKRRHTH INSRQDEPLL GPRSKRFDEL VFRSHNICEF TSESEELTGI SHRAFDKLNL  420
LDSGSSIQSS STVYNTPDMN YPREDCTSFT FY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.K0PT4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016195732.11e-175protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZP070.0A0A444ZP07_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.12e-30FAR1 family protein