PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.K06R1

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 191aa MW: 21729.8 Da PI: 6.8449

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.K06R1	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.4	1.5e-15	84	171	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY +YAk++ F ++++ ++ k ++ +++ C++ g re+ k+ r+++ + gCka++ vk +k + w++ k++l H H+++ Araip.K06R1 84 DFYVTYAKKARFATKIRMTTFDKITKAPINQAIHCNRDGIRESCVKA---PTRKNTISAAGCKARIYVKFDKdVQDWVLLKVDLTHFHPCS 171 6****************************************9999...88899999********99899***********986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.6E-12	84	172	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence Send to blast
MEVDIVEPLE CVASDDSENL SYEQENLAGD VAGHAHEPSK AAQLSDVTEL EVMRWSLLPD 60 HGCLQEDEIP RVGMQFAQLQ MAHDFYVTYA KKARFATKIR MTTFDKITKA PINQAIHCNR 120 DGIRESCVKA PTRKNTISAA GCKARIYVKF DKDVQDWVLL KVDLTHFHPC SPKKAVHYHE 180 YRQLTMHTKS V

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.K06R1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020972878.1	1e-120	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_025637656.1	1e-117	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445A4Y4	1e-116	A0A445A4Y4_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF17976	2	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-10	FAR1 family protein