PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.J3DSQ
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 149aa    MW: 16524.1 Da    PI: 11.2275
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.J3DSQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.51.6e-05111140537
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS- CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskK 37 
                  hn  E+ RR+ iN+++  L+ l+P++   ++ K
  Araip.J3DSQ 111 HNLSEK-RRSGINEKMKALQHLIPNSI--KNSK 140
                  777776.789***************72..5555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.105.0E-6103140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-5103140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.77E-6109148No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
QQQSILTLSL PRSSTSSPSV FTHSSTHQQS LFVLLSIWTK KKKNPVPPAK NSFNGTVGSV  60
AAAAHDIAFV VYLHFFANII QEGVEALAED VPVKSVPSRH SSKRSRAAEV HNLSEKRRSG  120
INEKMKALQH LIPNSIKNSK LMLRLYIRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.J3DSQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2348723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.18e-12phytochrome interacting factor 3-like 5