PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.ID7EL

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bZIP

Protein Properties

Length: 346aa MW: 36764.1 Da PI: 7.7568

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.ID7EL	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50	6.3e-16	292	339	7	54
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ ee+ + Araip.ID7EL 292 HRRMIKNRESAARSRARKQAYTMELEAEVQKLKEENQELQKKQEEIME 339 69**************************************99998876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.4E-8	286	345	IPR004827	Basic-leucine zipper domain
CDD	cd14707	2.23E-25	292	344	No hit	No description
SuperFamily	SSF57959	8.75E-11	292	338	No hit	No description
Pfam	PF00170	1.0E-12	292	340	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	293	308	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.6E-14	293	339	No hit	No description
PROSITE profile	PS50217	10.68	293	339	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence Send to blast
MNFKNFGNDP GPAAGGSGDA GGRPPGNFPL TRQPSVYNLT FDEFMNTMGG SGKDFGSMNM 60 DELLKNIWTA EEVQTMASAT GVGGEPGSAG FGGAGINNLQ RQGSLTLPRT LSQKTVDEVW 120 KDISKEYGGG STGGGGGGPN PAQTTQRQPT LKEITLEEFL VRAGVVREDA QLAAAGKAND 180 SVFVDLSRGG GNSGGLGVGF QQLNKVPGLM GDSVGVNNND PLVGLQPRTN LPVNVNGVRS 240 SNQQMQMQNS QSPHQHQPQI FPKQAPMSYA MPLVQGGGGG MGMVGLSPGP VHRRMIKNRE 300 SAARSRARKQ AYTMELEAEV QKLKEENQEL QKKQEEIMEI QKNQYS

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence Send to blast

MNFKNFGNDP GPAAGGSGDA GGRPPGNFPL TRQPSVYNLT FDEFMNTMGG SGKDFGSMNM  60
DELLKNIWTA EEVQTMASAT GVGGEPGSAG FGGAGINNLQ RQGSLTLPRT LSQKTVDEVW  120
KDISKEYGGG STGGGGGGPN PAQTTQRQPT LKEITLEEFL VRAGVVREDA QLAAAGKAND  180
SVFVDLSRGG GNSGGLGVGF QQLNKVPGLM GDSVGVNNND PLVGLQPRTN LPVNVNGVRS  240
SNQQMQMQNS QSPHQHQPQI FPKQAPMSYA MPLVQGGGGG MGMVGLSPGP VHRRMIKNRE  300
SAARSRARKQ AYTMELEAEV QKLKEENQEL QKKQEEIMEI QKNQYS

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.ID7EL

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by abscisic acid (ABA) and cold. {ECO:0000269\|PubMed:10636868}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KU877410	5e-48	KU877410.1 Oxytropis ochrocephala bZIP transcription factor mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025665363.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X2
Swissprot	Q9M7Q5	4e-69	AI5L4_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 4
TrEMBL	A0A445BS47	0.0	A0A445BS47_ARAHY; Uncharacterized protein
TrEMBL	A0A445BSD2	0.0	A0A445BSD2_ARAHY; Uncharacterized protein
STRING	GLYMA04G04170.1	1e-129	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1962	34	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.2	9e-44	ABRE binding factor 4

Publications ? help Back to Top
Fernando VCD,Al Khateeb W,Belmonte MF,Schroeder DF Role of Arabidopsis ABF1/3/4 during det1 germination in salt and osmotic stress conditions. Plant Mol. Biol., 2018. 97(1-2): p. 149-163 [PMID:29680877]