PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.I62ZT
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 266aa    MW: 29781.4 Da    PI: 9.1744
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.I62ZTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.55.8e-09105133331
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkas 31 
                  ++h + E++RR+++N ++  Lr+l+P+++
  Araip.I62ZT 105 EKHFATEKQRREQLNGKYKILRSLIPSPT 133
                  58*************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.20.20.1008.0E-4641IPR023210NADP-dependent oxidoreductase domain
PROSITE profilePS508889.077102166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-5105132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.33E-6105133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.44E-5105134No hitNo description
PfamPF000102.7E-6105133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF004751.4E-6134166IPR000807Imidazoleglycerol-phosphate dehydratase
SuperFamilySSF563001.21E-8166206IPR029052Metallo-dependent phosphatase-like
Gene3DG3DSA:3.60.21.101.3E-9166201IPR029052Metallo-dependent phosphatase-like
PfamPF032834.2E-9229257IPR004963Pectinacetylesterase/NOTUM
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000105Biological Processhistidine biosynthetic process
GO:0004424Molecular Functionimidazoleglycerol-phosphate dehydratase activity
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MAEDIRFFEL NTGAKIPSVG LGTFQAENPG ALAKAVTTAI KIYESLEVNH VKFIEFYDVR  60
AAKASLGALN RICIPGKQIK LEHGHPRIAM YWLGAGAMQL NFATEKHFAT EKQRREQLNG  120
KYKILRSLIP SPTKALLQAL GDRKGINRFG DFSAPLDEAL IHVSLEQKVV TTFSAPNYCY  180
RCGNMASILE VDDCKGHTFI LVGARDIFLP GRGWRNHASV CLDRRDTRLD FYNWNRIKVK  240
YCDGSLFTGD IEAVDPVSIV TLKILF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.I62ZT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0044974e-39AP004497.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT11C13, TM0029b, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016194150.11e-101uncharacterized protein LOC107635253
RefseqXP_016194151.11e-101uncharacterized protein LOC107635253
RefseqXP_016194153.11e-101uncharacterized protein LOC107635253
RefseqXP_020977616.11e-101uncharacterized protein LOC107635253
RefseqXP_020977617.11e-101uncharacterized protein LOC107635253
RefseqXP_025649778.11e-101uncharacterized protein LOC112744385
RefseqXP_029148181.11e-101uncharacterized protein LOC112744385
TrEMBLA0A444ZQT70.0A0A444ZQT7_ARAHY; Pectin acetylesterase