PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.I1L37
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 192aa    MW: 21684 Da    PI: 8.2504
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.I1L37genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.17.4e-14348555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 h ++Er+RR+++ ++f  L   +P +     +K +Ka+iL+ A++Y+k+Lq
  Araip.I1L37  3 HIMAERKRRQELTERFIALSATIPGL-----TKTDKASILRAAIDYVKQLQ 48
                 999**********************9.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.663147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.2E-18364IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-11348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.54E-12352No hitNo description
SuperFamilySSF474598.77E-18365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-15453IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MDHIMAERKR RQELTERFIA LSATIPGLTK TDKASILRAA IDYVKQLQER VQELEKQNKK  60
RSRESVILVK KSKNINNEKI LLEESTIIST SETRRSEDGG TGLPDIEARF MGKDVLIEIH  120
CEKENGIEMK ILNQLENLHL FVTGSSVLPF GNSALGITII AKMGDSCEMT VNDVVRNLRE  180
VFLKAHQNSH GI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1611ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.I1L37
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177509.21e-138transcription factor bHLH18
RefseqXP_025679628.11e-136transcription factor bHLH19
SwissprotQ9T0722e-48BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A445JRA92e-84A0A445JRA9_GLYSO; Transcription factor bHLH25 isoform B
STRINGGLYMA07G03060.12e-83(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.18e-49bHLH family protein