PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Araip.H0H56

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Dof

Protein Properties

Length: 331aa MW: 37607.9 Da PI: 7.0107

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.H0H56	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	1e-39	71	130	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +e+alkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+s Araip.H0H56 71 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRS 130 7899******************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	4.2E-34	73	129	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-25	74	123	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.646	75	129	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	77	113	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005730	Cellular Component	nucleolus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence Send to blast
MDPSSGQQNQ QVSDETYMYH FMCSNHHMFL LFLYLLIQMG NNNNNQSLES MMLGCTKQEQ 60 QQQEKKPRPQ PEQALKCPRC DSTNTKFCYY NNYSLSQPRY FCKSCRRYWT KGGTLRNVPV 120 GGGCRKNKRS CSSSSKRAQD QLPFNPDHNP LMNSLPPLSY DSEFTLALAR LQKQTGGVHL 180 GLDDHHDLSM LVNHTNTNTN TTTQQQQQGF LDALRSNGFN SNTMHSDLYY GGNGDMGEVY 240 NEIMLPYEQE MSVETTQAVT VTTTKQELCN VSYNCNSNNN NNNKVLWGFP WQINGDTNML 300 GDIDLSRASW NGNGPLTTPL SWHGLLNTPL M

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.H0H56

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015952352.1	1e-172	dof zinc finger protein DOF2.1
TrEMBL	A0A445E4G7	1e-170	A0A445E4G7_ARAHY; Uncharacterized protein
STRING	XP_004505949.1	1e-103	(Cicer arietinum)
STRING	GLYMA12G07710.1	1e-103	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5026	30	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28510.1	2e-39	Dof family protein