PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.G8G7Y
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 264aa    MW: 29876.8 Da    PI: 7.0111
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.G8G7YgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.2e-1384129555
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h + Er+RR+++ ++f  L   +P +     kK +Ka+iL++A++Y+k+Lq
  Araip.G8G7Y  84 HIMSERKRRQQMAEKFIALAAAIPGL-----KKIDKASILQEAINYVKELQ 129
                  8899**********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.93979128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.67E-1184133No hitNo description
Gene3DG3DSA:4.10.280.108.0E-1684142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-1084129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-1684142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.3E-1385134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MENWLSHLEI SGGGSGSSSV SFEEILSFNG GDHSSNNKDN NIIIIGDEAN KQEKKNSKRG  60
SLGNNNNNKR TTKKARNSIE ALDHIMSERK RRQQMAEKFI ALAAAIPGLK KIDKASILQE  120
AINYVKELQE RIALLEKESN NKEQLIVKKS QFCCSSLPCD KNNNDNNIGG NEMVLPEVEA  180
RLLEKEVLIR IHCEKRNGIM LELLAFLENN NLSLACSSFL PFGNYFCFFN KNTFFKRHER  240
GIQLNIERSG EDVEGVSFEV YEMQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18792ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.G8G7Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020967770.11e-159transcription factor NAI1, partial
TrEMBLA0A445JRD14e-59A0A445JRD1_GLYSO; Transcription factor bHLH25
TrEMBLK7KZB54e-59K7KZB5_SOYBN; Uncharacterized protein
STRINGGLYMA07G03081.17e-60(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14964813
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-25bHLH family protein