PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.FXX59
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 180aa    MW: 19956.5 Da    PI: 9.6574
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.FXX59genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.53.1e-2943100259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYG+K+ k+s+fprsYYrCt  gC++kk+ver  +dp+ v +tY g H h+
  Araip.FXX59  43 EDGYKWRKYGKKSLKKSPFPRSYYRCTAIGCNAKKRVERYVDDPTHVLTTYVGLHAHD 100
                  8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-2830102IPR003657WRKY domain
SuperFamilySSF1182909.55E-2736102IPR003657WRKY domain
PROSITE profilePS5081128.23137102IPR003657WRKY domain
SMARTSM007742.8E-3042101IPR003657WRKY domain
PfamPF031063.2E-224399IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MGLKLRASTM ASVADTMSMN NKRNKNNLSK ITYLTKSESE NLEDGYKWRK YGKKSLKKSP  60
FPRSYYRCTA IGCNAKKRVE RYVDDPTHVL TTYVGLHAHD LPPILPPPSR SFNLYNNSTV  120
SPDKGSDVQK PVLSDASAGA RERKHGNNTI TNVNVKTDSD SCVNDIGTIE DTGTGLLEDI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-23351021077Probable WRKY transcription factor 4
2lex_A1e-23351021077Probable WRKY transcription factor 4
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.FXX59
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016185367.11e-128probable WRKY transcription factor 68
RefseqXP_025635754.21e-128WRKY transcription factor 68-like
TrEMBLA0A445AFD32e-98A0A445AFD3_ARAHY; Uncharacterized protein
STRINGXP_004170818.12e-29(Cucumis sativus)
STRINGXP_004495894.18e-29(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2364423
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.14e-31WRKY DNA-binding protein 48