PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.FB87S
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TALE
Protein Properties Length: 889aa    MW: 99215.4 Da    PI: 7.2232
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.FB87SgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.91.9e-096787161854
                  HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  lFe   ++yp+ +++  LA+++gL+ +qV++WF N R +
  Araip.FB87S 678 LFEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 716
                  5775569******************************87 PP
2BELL89.82.8e-295436031272
         BELL  12 LlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                  L sl + V +rY+qy++q+q+v+ssFe vagl sa+pY+slAlk +SrhF+cLk+ i++q+
  Araip.FB87S 543 LASLANSVTRRYRQYHQQMQMVVSSFESVAGLSSATPYISLALKSVSRHFKCLKNSISDQL 603
                  7899******************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.3E-26389601IPR006563POX domain
PfamPF075264.0E-39394600IPR006563POX domain
PROSITE profilePS5007112.05657720IPR001356Homeobox domain
CDDcd000861.41E-11660721No hitNo description
SMARTSM003898.2E-9660724IPR001356Homeobox domain
SuperFamilySSF466893.64E-17661727IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-27663724IPR009057Homeodomain-like
PfamPF059204.2E-18677716IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0010229Biological Processinflorescence development
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 889 aa     Download sequence    Send to blast
MSGLRPDHQS PHHVAQQIRR DKLRVQNISH HPQSQDFPNN LEQFNLDLLQ VRNVRNAHNM  60
LDDEPHPPPP GVYSSQVSNF LSTPLNPLEY HELATVAAAE QPSSSCSRVM MHQSELRSLG  120
NWRSSANSNQ GCDWFVNYAS GSSSMANNES NNPNTTTHLA TEMNNVSYNQ HYEKPSCYNE  180
FTDVIANREI QKQLGGGVLH HPSSSSSMSP FYQNTLQDIV KSASISAQGS DNMASLMQQP  240
GHGIWVGDGS GLDLHPSYGN QPNQFRCAGG NPWTNRTVDN ALRWNSSPLG FIDKKDDEHS  300
GRPLMSNSNP QNLSLSLSSN SQSKTSVSQF EQVSASDDLQ CKDPQYMKYV RAFMKPSIVS  360
RDSGKSPQDP VGVPSSTSYR NVGPLGPFTG YATILKSSRF LKSAQQLLDE FCRISSPRFS  420
KSRDVTQRLS GEASASTSTD VITVDNQTEA AAKEGSNSGS SSSMFHGANE NKADWGTGSG  480
SCLSPRPDYQ QKKARLLFMQ EELGSFCMPK LMYLHNNPVL GTKIQKKNSF MLFLAWTLFY  540
VVLASLANSV TRRYRQYHQQ MQMVVSSFES VAGLSSATPY ISLALKSVSR HFKCLKNSIS  600
DQLKHISEVL GEDFSVPRTS TCGKDDTASM GRLSCMDQSF QKNKSGRGGT GLVEPQQHVW  660
RPQRGLPEHS VAILKAWLFE HFLHPYPTDT DKHMLATQTG LSRNQVSNWF INARVRVWKP  720
MVEEIHMLET KGTTGANKNN NNHPGTENER ACVNEDGSSS QQHRVMEGTQ SKFDMHSLIP  780
ENQQQSHECM ELEMESTTNE EQWSQEKRSK LECEMSSTSM DEGSLMMGFM PYSRRDHQVG  840
GLGSVSLTLG LRHGVEAVVQ NQQQQQQLQE EQLRRHFGGH MIHDFILVN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A1e-14666724563Homeobox protein Meis2
3k2a_B1e-14666724563Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.FB87S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016171911.10.0BEL1-like homeodomain protein 9
RefseqXP_020964299.10.0BEL1-like homeodomain protein 9
RefseqXP_020964300.10.0BEL1-like homeodomain protein 9
RefseqXP_020964301.10.0BEL1-like homeodomain protein 9
RefseqXP_025672602.10.0BEL1-like homeodomain protein 9
RefseqXP_025672603.10.0BEL1-like homeodomain protein 9
RefseqXP_025672604.10.0BEL1-like homeodomain protein 9
RefseqXP_025672605.10.0BEL1-like homeodomain protein 9
RefseqXP_025672606.10.0BEL1-like homeodomain protein 9
TrEMBLA0A444Y8060.0A0A444Y806_ARAHY; Uncharacterized protein
STRINGXP_007150172.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34813257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.13e-65BEL1-like homeodomain 8