PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.EQ8VB
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 426aa    MW: 48305.6 Da    PI: 6.6784
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.EQ8VBgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.74.4e-08344384954
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   r+RR++i +++  L++++P       +K++ a++L +A +Y+k L
  Araip.EQ8VB 344 ARQRREKISQKIRVLQKIVPGG-----TKMDTASMLDEAANYLKFL 384
                  69******************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.646335384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.5E-12341390IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.46E-10341389No hitNo description
SuperFamilySSF474599.16E-13341393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-11343393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-5344384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MFHLFFLPIP RFSTTKHTQI VSEFRFLVFN GSSSRFDQVV AGSRTAKRCF ISFNSIMDGL  60
NWDDATSQII ARNNTPILWS KQQQSQEIIL TYPNSEHLIN YQQQDAATVV KSSAIMSLSE  120
NGPYNMDNYY QISGKYMTDF NMAQQHQQHD HHHHHCLISS ATNSNTNDDD NDGISKILLS  180
DDDCKNYLWN LSSSTTDAAS SAESESNNNN NNDASMLPCS HQNSSDHQQY INQGGQFNPI  240
IITNKDHSPI IKIENPPRSK KPRWEKTPFS STISFQNPNE ASATMSSTST TEEEADPEAI  300
AQMKEMIYRA AAFRPVNLLD SDEVIEKPKR KNVRVSSDPQ TVAARQRREK ISQKIRVLQK  360
IVPGGTKMDT ASMLDEAANY LKFLRSQVKA LENLGNNTTK VEAMDYNNYN SFVFSFNPSF  420
HSQIHF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.EQ8VB
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016174009.10.0transcription factor bHLH87-like
RefseqXP_016174010.10.0transcription factor bHLH87-like
RefseqXP_020968047.10.0transcription factor bHLH87-like
RefseqXP_020968048.10.0transcription factor bHLH87-like
RefseqXP_025679787.10.0transcription factor bHLH87
RefseqXP_025679788.10.0transcription factor bHLH87
RefseqXP_025679789.10.0transcription factor bHLH87
RefseqXP_025679790.10.0transcription factor bHLH87
TrEMBLA0A444XCV80.0A0A444XCV8_ARAHY; Uncharacterized protein
STRINGXP_004510332.17e-92(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45303257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.12e-54bHLH family protein