PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.EM5UC | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | TALE | ||||||||
Protein Properties | Length: 504aa MW: 56534 Da PI: 7.217 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.3 | 6.1e-09 | 434 | 471 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ L +++gL+ +qV++WF N R + Araip.EM5UC 434 FEHflHPYPTDSEKDTLVQQTGLSRCQVSNWFINARVR 471 554459******************************88 PP | |||||||
2 | BELL | 33.6 | 9.9e-12 | 349 | 383 | 38 | 72 |
BELL 38 eavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e vaglg+a+pY+s+ k iS+hF cLk ai +q+ Araip.EM5UC 349 EKVAGLGNATPYISFGIKSISKHFGCLKHAIYDQL 383 689*****************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00177 | 0.0084 | 1 | 185 | No hit | No description |
Gene3D | G3DSA:3.40.50.300 | 2.2E-72 | 6 | 194 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SuperFamily | SSF52540 | 1.38E-58 | 8 | 178 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
PROSITE profile | PS51419 | 36.177 | 8 | 220 | No hit | No description |
CDD | cd01868 | 1.59E-127 | 10 | 174 | No hit | No description |
SMART | SM00173 | 5.9E-28 | 10 | 176 | No hit | No description |
TIGRFAMs | TIGR00231 | 2.7E-39 | 11 | 169 | IPR005225 | Small GTP-binding protein domain |
PRINTS | PR00449 | 5.4E-39 | 13 | 34 | No hit | No description |
SMART | SM00175 | 1.1E-112 | 13 | 176 | No hit | No description |
Pfam | PF00071 | 1.6E-60 | 14 | 173 | IPR001806 | Small GTPase superfamily |
SMART | SM00174 | 6.8E-11 | 15 | 172 | No hit | No description |
SMART | SM00176 | 7.7E-11 | 18 | 230 | No hit | No description |
PRINTS | PR00449 | 5.4E-39 | 36 | 52 | No hit | No description |
PRINTS | PR00449 | 5.4E-39 | 54 | 76 | No hit | No description |
PRINTS | PR00449 | 5.4E-39 | 116 | 129 | No hit | No description |
PRINTS | PR00449 | 5.4E-39 | 151 | 173 | No hit | No description |
SMART | SM00574 | 3.5E-5 | 280 | 381 | IPR006563 | POX domain |
Pfam | PF07526 | 1.4E-6 | 349 | 379 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 11.612 | 412 | 475 | IPR001356 | Homeobox domain |
SMART | SM00389 | 2.7E-10 | 415 | 479 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.51E-12 | 416 | 476 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 2.5E-27 | 418 | 482 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 6.42E-17 | 419 | 483 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 1.7E-18 | 432 | 471 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0007264 | Biological Process | small GTPase mediated signal transduction | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005525 | Molecular Function | GTP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 504 aa Download sequence Send to blast |
MAYKVDHEYD YLFKVVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT 60 VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF DNVQRWLREL RDHADSNIVI 120 MMAGNKSDLN HLRAVSTEDA ESLAEKEGLS FLETSALEAY NVEKAFQTIL FDIYHIISKK 180 ALAAQEATSA GVPQGTTINV ANTANNAESS RWNYTSLTIK STKPPYHDSF LAKSSSQLEH 240 YPASFHNLLL PPYLVDQNHH VPQEPCSDVR NIGPVVVPFT GYASILKRSR FLKPAQQILE 300 DMCGSVLDPP PRLNESGDDH EEDPIIGTNG RDGVQHHCRD SVLGCMLDEK VAGLGNATPY 360 ISFGIKSISK HFGCLKHAIY DQLQFTMKNT TPASNNVVEK GLQSVQSLHS VQPVLRSQRG 420 LPDHAVALLR RWLFEHFLHP YPTDSEKDTL VQQTGLSRCQ VSNWFINARV RIWKPMVEEM 480 HMNGLQKTQE SEVIHHARKP TIGP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5fbl_B | 2e-98 | 6 | 183 | 10 | 187 | Ras-related protein Rab-11A |
5fbq_B | 2e-98 | 6 | 183 | 10 | 187 | Ras-related protein Rab-11A |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.EM5UC |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020962971.1 | 0.0 | BEL1-like homeodomain protein 9 isoform X2 | ||||
Refseq | XP_025668588.1 | 0.0 | BEL1-like homeodomain protein 9 isoform X2 | ||||
TrEMBL | A0A444YD05 | 0.0 | A0A444YD05_ARAHY; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27990.1 | 9e-48 | BEL1-like homeodomain 8 |