PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.EM5UC
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TALE
Protein Properties Length: 504aa    MW: 56534 Da    PI: 7.217
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.EM5UCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.36.1e-094344711954
                  HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  Fe   ++yp+ +e+  L +++gL+ +qV++WF N R +
  Araip.EM5UC 434 FEHflHPYPTDSEKDTLVQQTGLSRCQVSNWFINARVR 471
                  554459******************************88 PP

2BELL33.69.9e-123493833872
         BELL  38 eavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                  e vaglg+a+pY+s+  k iS+hF cLk ai +q+
  Araip.EM5UC 349 EKVAGLGNATPYISFGIKSISKHFGCLKHAIYDQL 383
                  689*****************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM001770.00841185No hitNo description
Gene3DG3DSA:3.40.50.3002.2E-726194IPR027417P-loop containing nucleoside triphosphate hydrolase
SuperFamilySSF525401.38E-588178IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS5141936.1778220No hitNo description
CDDcd018681.59E-12710174No hitNo description
SMARTSM001735.9E-2810176No hitNo description
TIGRFAMsTIGR002312.7E-3911169IPR005225Small GTP-binding protein domain
PRINTSPR004495.4E-391334No hitNo description
SMARTSM001751.1E-11213176No hitNo description
PfamPF000711.6E-6014173IPR001806Small GTPase superfamily
SMARTSM001746.8E-1115172No hitNo description
SMARTSM001767.7E-1118230No hitNo description
PRINTSPR004495.4E-393652No hitNo description
PRINTSPR004495.4E-395476No hitNo description
PRINTSPR004495.4E-39116129No hitNo description
PRINTSPR004495.4E-39151173No hitNo description
SMARTSM005743.5E-5280381IPR006563POX domain
PfamPF075261.4E-6349379IPR006563POX domain
PROSITE profilePS5007111.612412475IPR001356Homeobox domain
SMARTSM003892.7E-10415479IPR001356Homeobox domain
CDDcd000861.51E-12416476No hitNo description
Gene3DG3DSA:1.10.10.602.5E-27418482IPR009057Homeodomain-like
SuperFamilySSF466896.42E-17419483IPR009057Homeodomain-like
PfamPF059201.7E-18432471IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007264Biological Processsmall GTPase mediated signal transduction
GO:0003677Molecular FunctionDNA binding
GO:0005525Molecular FunctionGTP binding
Sequence ? help Back to Top
Protein Sequence    Length: 504 aa     Download sequence    Send to blast
MAYKVDHEYD YLFKVVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT  60
VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF DNVQRWLREL RDHADSNIVI  120
MMAGNKSDLN HLRAVSTEDA ESLAEKEGLS FLETSALEAY NVEKAFQTIL FDIYHIISKK  180
ALAAQEATSA GVPQGTTINV ANTANNAESS RWNYTSLTIK STKPPYHDSF LAKSSSQLEH  240
YPASFHNLLL PPYLVDQNHH VPQEPCSDVR NIGPVVVPFT GYASILKRSR FLKPAQQILE  300
DMCGSVLDPP PRLNESGDDH EEDPIIGTNG RDGVQHHCRD SVLGCMLDEK VAGLGNATPY  360
ISFGIKSISK HFGCLKHAIY DQLQFTMKNT TPASNNVVEK GLQSVQSLHS VQPVLRSQRG  420
LPDHAVALLR RWLFEHFLHP YPTDSEKDTL VQQTGLSRCQ VSNWFINARV RIWKPMVEEM  480
HMNGLQKTQE SEVIHHARKP TIGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fbl_B2e-98618310187Ras-related protein Rab-11A
5fbq_B2e-98618310187Ras-related protein Rab-11A
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.EM5UC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020962971.10.0BEL1-like homeodomain protein 9 isoform X2
RefseqXP_025668588.10.0BEL1-like homeodomain protein 9 isoform X2
TrEMBLA0A444YD050.0A0A444YD05_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.19e-48BEL1-like homeodomain 8