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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Araip.D9UVA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family |
TALE |
Protein Properties |
Length: 534aa MW: 58836.4 Da PI: 5.8885 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Araip.D9UVA | genome | NCGR_PGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 25.4 | 2.4e-08 | 453 | 491 | 18 | 54 |
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
+F++ ++yp +e+ LA k gLt +qV++WF N R +
Araip.D9UVA 453 MFQNflHPYPRDAEKHLLAVKSGLTRSQVSNWFINARVR 491
5887779******************************88 PP
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2 | BELL | 26.8 | 1.3e-09 | 351 | 387 | 1 | 37 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissF 37
+r++ ++ k++Ll+ll+ Vd rY+q+ ++++tv+ F
Araip.D9UVA 351 QRHAAESNKSQLLTLLQLVDSRYSQCLDEIHTVAKQF 387
688999***************************9888 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0008285 | Biological Process | negative regulation of cell proliferation |
GO:0009640 | Biological Process | photomorphogenesis |
GO:0010073 | Biological Process | meristem maintenance |
GO:0010227 | Biological Process | floral organ abscission |
GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
GO:0010371 | Biological Process | regulation of gibberellin biosynthetic process |
GO:0090470 | Biological Process | shoot organ boundary specification |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 534 aa
Download sequence Send
to blast |
MENDFYSSSL NMEHHPTPKP LLQCYSFDLN NQNNIINGIP MLDLDQGGVD GNSFINSSSI 60 LNSNSFVTSS QGKTTVGDTL NATGNGEFHE NLAGGTQPNG ALASPLTTIL AARIGLQENL 120 ENSATLLPSF EALGQYVFNN WHDTTSNSSP FPATFYGDRG YDEVPSNGKW SFNKFPKAPE 180 VEGSGLVPYA SIGNLDPNGW TSLNGANLAN HAYNSSSYSN ELSLSLATSP AAAQCSEISC 240 SDVSCGMNET RTGLEKGSCS SRELSMSLGS EKHVRFSPVI LGSKYLVGIQ EVLAQIAAYS 300 IENVEEVNYL GAGDRAGGNK STSGFAQKTT AATNSNANSS MFEAHAESPL QRHAAESNKS 360 QLLTLLQLVD SRYSQCLDEI HTVAKQFLER ISNHILATGT NFGESCSEDK EWSVDTSFIQ 420 KQWAIQQLKR KDQLWRPQRG LPEKSVSVLR AWMFQNFLHP YPRDAEKHLL AVKSGLTRSQ 480 VSNWFINARV RLWKPMIEEM YAEMNRRKAC RIEEGMEDGH RSRLSMNNHY FNMN
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
4xrm_A | 7e-15 | 441 | 499 | 5 | 63 | Homeobox protein Meis2 |
4xrm_B | 7e-15 | 441 | 499 | 5 | 63 | Homeobox protein Meis2 |
4xrs_A | 6e-15 | 441 | 498 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 6e-15 | 441 | 498 | 1 | 58 | Homeobox protein Meis1 |
5bng_A | 6e-15 | 441 | 499 | 1 | 59 | Homeobox protein Meis2 |
5bng_B | 6e-15 | 441 | 499 | 1 | 59 | Homeobox protein Meis2 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in the signal transduction pathway downstream of the COP1 gene. Controls floral competency as a specific activator of FLC expression. Is responsive of the nuclear import of SHOOT MERISTEMLESS (STM). {ECO:0000269|PubMed:17908157}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By light. In etiolated seedlings, maximally expressed after 3 days of illumination. |