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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Araip.D1B6K |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family |
Trihelix |
Protein Properties |
Length: 458aa MW: 52654.2 Da PI: 8.2795 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Araip.D1B6K | genome | NCGR_PGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 94.9 | 7.8e-30 | 7 | 90 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW++qe+laL+++r++m++ +r++ lk+plWeevs+k+ e g++rs+k+Ckek+en+ k++k++keg+ ++++++ t+++fdql+
Araip.D1B6K 7 RWPRQETLALLKIRSDMDSVFRDSTLKGPLWEEVSRKLGEIGYKRSAKKCKEKFENVYKYHKRTKEGRTGKSEGK--TYKFFDQLQ 90
8********************************************************************975544..6******98 PP
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2 | trihelix | 101.9 | 5.1e-32 | 283 | 368 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k ev+aLi++r+++++++ ++ k+plWe++s m++ g++rs+k+Ckekwen+nk++kk+ke++k+r e+s+tcpyf++lea
Araip.D1B6K 283 RWPKGEVHALIRLRTSLDSKYMENGPKAPLWEDISGGMQRLGYNRSAKRCKEKWENINKYFKKVKESNKQR-REDSKTCPYFHELEA 368
8*********************************************************************8.78999********85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 458 aa
Download sequence Send
to blast |
MSFGGNRWPR QETLALLKIR SDMDSVFRDS TLKGPLWEEV SRKLGEIGYK RSAKKCKEKF 60 ENVYKYHKRT KEGRTGKSEG KTYKFFDQLQ ALENHNQFNN THPPPKSSQP LLPTNPTLVN 120 SSALPSTTVT AAVTTNNISS TTFAPHSFPN NNSMNLFSSP SSSPSSSTAS DEGLEERYKK 180 KRKWKDYFRK LTRQVLAKQE EMQNRFXLQE MSRIANEHDV LVQERSTAAA KDAAVIALLH 240 KLSGHETQSP QTQTQIQKQQ TIKAKNSSSR EIVERMSCSS SSRWPKGEVH ALIRLRTSLD 300 SKYMENGPKA PLWEDISGGM QRLGYNRSAK RCKEKWENIN KYFKKVKESN KQRREDSKTC 360 PYFHELEALY KDKISNNTSF GSFQNNMEPL MVQPEQQWRP PPESNKDNNN ESNEEEEEEE 420 YDDDGVEEEE EDSVGEEEEG LNRYQIVTNK VSSVDTVE
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015044 | 3e-41 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |