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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.C9ZKH | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 64aa MW: 7631.87 Da PI: 11.6817 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.4 | 1.1e-07 | 21 | 46 | 6 | 30 |
HHHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 6 nerErrRRdriNsafeeLrellPk.a 30 +++Er RR ri +++ +L+el+P+ + Araip.C9ZKH 21 SIAERVRRTRISDRIRKLQELVPNmD 46 689********************955 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.324 | 15 | 64 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 9.03E-8 | 18 | 51 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.8E-7 | 20 | 50 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.0E-5 | 21 | 46 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 64 aa Download sequence Send to blast |
MKDSVPWKVR AKRGCATHPR SIAERVRRTR ISDRIRKLQE LVPNMDKELS EQQQRCNCVV 60 QRSR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.C9ZKH |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016193264.2 | 2e-34 | transcription factor bHLH81 | ||||
Refseq | XP_025643122.1 | 2e-34 | transcription factor bHLH81-like isoform X1 | ||||
Swissprot | Q9M0R0 | 1e-25 | BH081_ARATH; Transcription factor bHLH81 | ||||
TrEMBL | A0A445E1L5 | 4e-32 | A0A445E1L5_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA08G26110.1 | 1e-25 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9132 | 30 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09180.1 | 1e-17 | bHLH family protein |
Publications ? help Back to Top | |||
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