PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.C9W46
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 658aa    MW: 76680.1 Da    PI: 6.8287
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.C9W46genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY43.18.5e-14597653659
                  -EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   6 nWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +W+K GqK+  gs +p  YY C ++   gC+++ +v++ +e+p++ e+ Y+g H+++
  Araip.C9W46 597 HWKKHGQKTFIGSSYPIEYYWCIHKfnqGCHATIQVQQIQENPSMYETRYTGLHTCN 653
                  6**********************99999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF747883.92E-65200537IPR016159Cullin repeat-like-containing domain
PfamPF030815.3E-28252398IPR004140Exocyst complex protein Exo70
PfamPF030811.2E-24407540IPR004140Exocyst complex protein Exo70
Gene3DG3DSA:2.20.25.801.8E-13587653IPR003657WRKY domain
PROSITE profilePS5081114.504587655IPR003657WRKY domain
SuperFamilySSF1182906.93E-14589654IPR003657WRKY domain
SMARTSM007741.9E-13591654IPR003657WRKY domain
PfamPF031064.6E-12597652IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006887Biological Processexocytosis
GO:0000145Cellular Componentexocyst
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 658 aa     Download sequence    Send to blast
MEICGFFVYP NCSTLFCFEF LFQTSIWRME LIEDFHLCKC ELHYLYRDVI CIQVPCFLES  60
LMESTVNGNP DMFSLVSSVA FAIMFLSLSR QVDFGFEVDL FNFFLGYFLV QLMKIHIALI  120
FLGASICYFF TCLRSYLDNK QPLNGSNVAH SVVQIALEIE DGRNTVNKKE NLYLILGIEE  180
KREDMVIFPI DMEEKIRTAI FEKAGYDEEC YNVYLTWRRQ ILAEKMRKID MQKLLIKEIK  240
GVPLDYLQKK IQRWIMSFEY SIRILFSEER NLSNSVFVEC SSSSNYADLC FMELCRAPMT  300
LLLDFANAVA NSAGSPLRLF RLLKVFEALK EMLPEIETLF SDECGGVAIR DEAIGILARL  360
REAIRSVFAD LETLICKNEI SVGIVNGGGI HPITYYVFEN NNNNHGVEFY LARILLLLEQ  420
SLKAKSKEMY KDSTLGLVFL MNNYTYMVNC VKHSKLGELL GENWIKNHIV AKFRQCFKIY  480
KANSWDQVFR GKLISEFVLK FVEICDVQSC WIIFDDHLRR KIRNNLKETL LARFKSVIEG  540
SQENINICGD FGFGVRDIVA GIDKLFKGRD ELKNHREIHP TWTTALHEHN IKDFHKHWKK  600
HGQKTFIGSS YPIEYYWCIH KFNQGCHATI QVQQIQENPS MYETRYTGLH TCNLHTFI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4rl5_A5e-43203539146524Exocyst complex component EXO70A1
4rl5_B5e-43203539146524Exocyst complex component EXO70A1
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.C9W46
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016203795.10.0exocyst complex component EXO70B1
RefseqXP_025631114.10.0exocyst complex component EXO70B1-like
TrEMBLA0A445AML60.0A0A445AML6_ARAHY; Exocyst subunit Exo70 family protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.15e-14WRKY DNA-binding protein 46