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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.BS0L7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 221aa MW: 24887.2 Da PI: 10.4019 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 23 | 1.6e-07 | 84 | 100 | 2 | 18 |
--SS-EEEEEEE--TT- CS WRKY 2 dDgynWrKYGqKevkgs 18 +D ++WrKYGqK++k+ Araip.BS0L7 84 SDSWAWRKYGQKPIKDR 100 69*************84 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.2E-6 | 78 | 112 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-5 | 80 | 101 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 8.559 | 84 | 143 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MDSKLRNRSS RSSRNLYMKE QEDNDGADSP PSNSTLFNID ALVTSSPSSS SKRRRGVEKR 60 VVHIRIKEGE GPRLKGENNT PPPSDSWAWR KYGQKPIKDR LIRSPSPPPR TYLWTRSNRI 120 LRATTPSFMT LAGSVTSRGI PPRLCPPYWT APYIFSGYDD ADVATSVVLP MGKLPECSLV 180 FRRGDDSLFA DLGELPECSL VFRRGLLETA EQRRRWCGTP S |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.BS0L7 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016191339.2 | 2e-58 | LOW QUALITY PROTEIN: probable WRKY transcription factor 65 | ||||
TrEMBL | A0A444ZRG0 | 9e-47 | A0A444ZRG0_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA08G12460.1 | 3e-38 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF24051 | 3 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 5e-17 | WRKY DNA-binding protein 65 |