PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.BCK9L
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 247aa    MW: 28784.5 Da    PI: 6.1014
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.BCK9LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.24.7e-22130224190
         FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fYneY++  GFs+++sk  ks     +gei ++ fvCs++g+r+ ++ +  e++  +r+ tr+gC a++kv+ ++  g+w v+k+  eHnHe+ 
  Araip.BCK9L 130 DFYNEYGRIQGFSIQRSKVGKStkiGSEGEILWQIFVCSRQGERDAKHIHrVERKMDPRPITRCGCGAQIKVHVDQsIGRWFVDKFCDEHNHEML 224
                  6****************9999966677999**************9998874677778*****************9999**************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.2E-19130224IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MRVLIVDQFG YPFFWGIPRD VAGDLCRRTV KCCGYYKIRL GGWKEATQSL RTFDNDPKYR  60
SVLVLAGQVV TGETFDVDEE DAEYGEDYEQ QHEPGMIVDG IGSFNRIDFS SLTYEEMQRF  120
EFVDLQIAYD FYNEYGRIQG FSIQRSKVGK STKIGSEGEI LWQIFVCSRQ GERDAKHIHR  180
VERKMDPRPI TRCGCGAQIK VHVDQSIGRW FVDKFCDEHN HEMLDARFRG LLRSHRVINE  240
GDMHQIN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.BCK9L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020972915.11e-103protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445CB401e-143A0A445CB40_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3290752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-14FAR1-related sequence 5