PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.B6R33
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 334aa    MW: 36862.1 Da    PI: 6.9255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.B6R33genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.81.9e-13117168155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  Araip.B6R33 117 QRMTHIAVERNRRKQMNDYLAVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 168
                  79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.39E-14115172No hitNo description
SuperFamilySSF474598.37E-17116183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-13116172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.421116167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-10117168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-10122173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MALEAVVFPQ DPLFSYASST TTTKDYFYSS FLGSHHHDLI GIINNNIIQQ NQATNNSDSS  60
SPPSNNDHWD HSHYATSSSS PDCCAATVDQ PSVPTTTGRR KRRRTKTTKN KEDIENQRMT  120
HIAVERNRRK QMNDYLAVLR SLMPPSYVQR GDQASIIGGA INFVKELEQL LQSMEGQKKP  180
NHHDTTAAGG AAGMNSSGQS SPFGEFFAFP QYTTRGHHQG NNNATTMAAE QQQKQWAPAV  240
ADIEVTMVDS HANLKILSKK RHGQLMKMVV GLQSLSLTIL HLNVTTLHDF VIALTFVANF  300
EDGCQLNTVD EIAAAVNQLL CAVQQEASSF NEIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199103RKRRR
299104RKRRRT
3117128RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.B6R33
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020963642.10.0transcription factor bHLH96
SwissprotQ9C7T43e-85BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A445C9C80.0A0A445C9C8_ARAHY; Uncharacterized protein
STRINGGLYMA14G35560.11e-114(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.18e-78bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]