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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Araip.A9XWC |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family |
TALE |
Protein Properties |
Length: 298aa MW: 33749.3 Da PI: 6.5973 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Araip.A9XWC | genome | NCGR_PGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 28.2 | 3.2e-09 | 229 | 284 | 3 | 55 |
--SS--HHHHHHHHHHHH...HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFe...knrypsaeereeLAkklgLterqVkvWFqNrRake 55
kR ++ k+ ++L + + k +yp+++++ LAk++gL+++q+ +WF N+R ++
Araip.A9XWC 229 KRGKLPKDARQTLLQWWNihyKWPYPTEADKVALAKSTGLDQKQINNWFINQRKRH 284
555555566666655555443679*****************************885 PP
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2 | ELK | 28.8 | 2.8e-10 | 204 | 225 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
+LK+ LlrK++++++sLk EFs
Araip.A9XWC 204 DLKDKLLRKFGSHISSLKFEFS 225
69*******************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MEDEMYGVPP SSTTVYSDRA PLTPDNLIFP VEYHSFLMST GARIPMFGSD ELLSAAASGV 60 TAITEAEPSS NIVVPEILQR HHSHDAASSS HMKAKIASHP YYPRLLQAYI DCQKVGAPPE 120 IASLLEEIQR ENDLCKGDVN STCIGADPEL DEFMETYCDM LVKYKCDLTR PFEEASSFLN 180 KIETQLSNLC CTGASAPASL SDRDLKDKLL RKFGSHISSL KFEFSKKKKR GKLPKDARQT 240 LLQWWNIHYK WPYPTEADKV ALAKSTGLDQ KQINNWFINQ RKRHWKPSEN MQFNFYEG
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 225 | 232 | KKKKRGKL |
Functional Description ? help
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Source |
Description |
UniProt | Plays a role in meristem function. Contributes to the shoot apical meristem (SAM) maintenance and organ separation by controlling boundary establishment in embryo in a CUC1, CUC2 and STM-dependent manner. Involved in maintaining cells in an undifferentiated, meristematic state. Probably binds to the DNA sequence 5'-TGAC-3'. {ECO:0000269|PubMed:16798887}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Seems to be repressed by AS2 and AS1 but induced by STM, CUC1 and CUC2. {ECO:0000269|PubMed:11311158, ECO:0000269|PubMed:16798887}. |