PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.7P91S
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 345aa    MW: 38834.8 Da    PI: 8.91
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.7P91SgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.6e-10178223555
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h + Er+RR+++ ++f  L   +P +     kK +K++iL +A+ ++k+L+
  Araip.7P91S 178 HIMTERKRRRELTERFIALSATIPGL-----KKIDKSTILSEAISHVKQLK 223
                  8999**********************.....9*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.992173222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.37E-15176243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.9E-15178236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.4E-8178222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.03E-9178227No hitNo description
SMARTSM003537.8E-11179228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MGEPCHNYWY SDMGIQDDDI FNQRYKINTS LIVDKDHIIR EIMDHHDYHH QPAFSSESDN  60
SHSPTNNNRS GGSGNTRGFV FNNNNNNGSM SMFSQQHQHA PLLLDMKAST STSSPRSYIL  120
SFHDSTVIAT TAAAAATPPP PPSLETYNNN GKRPYQHIEV PLENQAKKVR SSSETLDHIM  180
TERKRRRELT ERFIALSATI PGLKKIDKST ILSEAISHVK QLKQRVKELE EQRKKISVES  240
VSFIIRKSHL INGTTNNKVD DEGAINNKAA TSEIALLPTV EARVFKNDVL IRIHCMKQSG  300
IMLKILGHLK SFDLSAISNS VLPFGNSTLD ITIIAQVYIY IYAQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1182186RKRRR
2222234KQRVKELEEQRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.7P91S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172322.10.0transcription factor NAI1-like isoform X1
RefseqXP_025674405.10.0transcription factor NAI1
TrEMBLA0A445BQK40.0A0A445BQK4_ARAHY; Uncharacterized protein
STRINGGLYMA08G23062.11e-103(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1625679
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22770.13e-29bHLH family protein