PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.6K1VA
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 395aa    MW: 43147.2 Da    PI: 7.5021
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.6K1VAgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-09207254455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Araip.6K1VA 207 SHSLAERVRREKISERMKFLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 254
                  8**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.59E-17201272IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.63E-11201258No hitNo description
Gene3DG3DSA:4.10.280.105.9E-17203271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.586203253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.4E-7207254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-9209259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MLHCLNSNAS GSEMTVLERQ RATIKWQHNN NHHQGYSSSS SPSPSSSSSI SLVQVQSSSP  60
ACLAAGAWPK LDNNFLMGFT SSPSSGFPLP PPPPPTTSAA SFDLNSAISR TSSCPLPSLA  120
EGKETTTPNN KRKTDKFHNT KVVASDNDNK DKRVKVAAPN DSATVGKKGT QDCGDNSNKD  180
NSKVSEVQNQ KPDYIHVRAR RGQATDSHSL AERVRREKIS ERMKFLQDLV PGCNKITGKA  240
GMLDEIINYV QSLQRQVEFL SMKLAAVNPR LDFNMDDLFT REVFPACAAS FPAIEMSPNM  300
ANPASYLHFN SSQQIDAGIN PQDISLRRTI SAPVSAPETF LDSSCFTQTL PSSTWEGDFQ  360
NLYSVAFDQA RAASFPSQLF TGLLEPSNLK MEMEM
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.6K1VA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016167250.10.0transcription factor bHLH63
RefseqXP_025665914.10.0transcription factor bHLH63
TrEMBLA0A445CFS00.0A0A445CFS0_ARAHY; Uncharacterized protein
STRINGAES741861e-133(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36183463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.16e-63cryptochrome-interacting basic-helix-loop-helix 1