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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.67R8V | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 471aa MW: 52576.6 Da PI: 4.9361 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 100.9 | 1.8e-31 | 129 | 269 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.......tksg 81 p+G++F+P+d el+ e+L+ k+ + + + +i+e +i++++P++Lp vk++ ++ +fF+++ ++y+tg+rk+r+ ++ Araip.67R8V 129 PVGVKFDPSDVELL-EHLAGKCGIGNaqlhmfI---NefipTIEEEeGICYTHPENLP-GVKKDGSSAHFFHRTTNAYTTGQRKRRKihhqcltEEHV 221 89************.99***9887774555442...044444776668**********.67788899*******************867777744488 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+k++l+ +g ++g kk++v+y ++ +k+ kt+Wvmh+y+l Araip.67R8V 222 RWHKTGKTKAILE-DGVHKGFKKIMVLYirPKKGSKPDKTNWVMHQYHL 269 9************.999***********7634666667*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.62E-36 | 113 | 288 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 29.931 | 128 | 288 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-12 | 129 | 269 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 471 aa Download sequence Send to blast |
MHSLFPLPTK TPGYNFPLTL PTVAFFVSLS IENGKPMLKL NTLHSSASAQ ASSSSSLQWL 60 GLEGEGKEVK GLKSKRSWLI DIGGFAKKVK STNLSPADQI KDCGAYRDCP NCHYRIDNRD 120 VSTEWPGFPV GVKFDPSDVE LLEHLAGKCG IGNAQLHMFI NEFIPTIEEE EGICYTHPEN 180 LPGVKKDGSS AHFFHRTTNA YTTGQRKRRK IHHQCLTEEH VRWHKTGKTK AILEDGVHKG 240 FKKIMVLYIR PKKGSKPDKT NWVMHQYHLG TDEEEKNGEY VVSKIFQKQT EKNEENPAVE 300 DSDQNEKNEN RLADDSNCIA SRTSPRTPKP NPPNPPRAGN FVDNDDNIDE TELPFTQDVK 360 CVPQCDVLDQ NNAGDPAWLA GESQAVENFD FDGLDDILFC NEIFDSSSLL DISGTETMIN 420 GSASNDMLGN DGLSYGTSVL DTLDLGTPPD FDLSNLNFYS QDSIFDWVDR L |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.67R8V |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016162321.1 | 0.0 | SUPPRESSOR OF GAMMA RESPONSE 1 | ||||
TrEMBL | A0A444YT55 | 0.0 | A0A444YT55_ARAHY; Uncharacterized protein | ||||
STRING | XP_004499395.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7572 | 30 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01600.1 | 2e-91 | NAC domain containing protein 44 |