PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

BES1

Protein Properties

Length: 703aa MW: 78432.2 Da PI: 4.9287

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.5ZJ5X	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	143.2	2.4e-44	79	218	1	134
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl..eeaeaagssasaspess 93 g+++r ++ +E+E++k+RERrRRai+aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ +g++p+ ++a ++ ss s+ ++ Araip.5ZJ5X 79 GSARRCRPLEEKERTKLRERRRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPprsQGQRPTggNSAVVTPSSPVPSQPTP 176 578999*************************************************************98889999997555555555556666565 PP DUF822 94 lq.sslkssalaspvesysaspksssfpspssldsislasaa 134 + + ++s +s +e +++k + +p ps +d s++ ++ Araip.5ZJ5X 177 SAsIRGVASGYRSSLEYNTCQTKGVFMPTPSPYDLSSSSRSQ 218 55477889999*********************98776543 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	4.3E-39	81	216	IPR008540	BES1/BZR1 plant transcription factor, N-terminal
SuperFamily	SSF51445	3.43E-180	262	699	IPR017853	Glycoside hydrolase superfamily
Gene3D	G3DSA:3.20.20.80	2.3E-195	263	697	IPR013781	Glycoside hydrolase, catalytic domain
Pfam	PF01373	5.7E-102	269	689	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.9E-67	300	314	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.9E-67	321	339	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.9E-67	343	364	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.9E-67	436	458	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.9E-67	509	528	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.9E-67	543	559	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.9E-67	560	571	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.9E-67	578	601	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	6.9E-67	618	640	IPR001554	Glycoside hydrolase, family 14

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000272	Biological Process	polysaccharide catabolic process
GO:0048831	Biological Process	regulation of shoot system development
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0016161	Molecular Function	beta-amylase activity

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence Send to blast
MATDMQRLIG TSEDDDEEIE MDVKEEDDED GDEEENGGDH GNASEMVGID GGNGLVTAGG 60 DNSFQQQQQF QEQVGTPGGS ARRCRPLEEK ERTKLRERRR RAITAKILAG LRRHGNYNLR 120 VRADINDVIA ALAREAGWVV LPDGTTFPPR SQGQRPTGGN SAVVTPSSPV PSQPTPSASI 180 RGVASGYRSS LEYNTCQTKG VFMPTPSPYD LSSSSRSQTS MVGDGELQRD NQPLVGSGSM 240 DTVHEKQIID LPCRLSERDL AGTPYVPVYV MLPLGVINIK CELVDPDGLL KQLKVLKSIN 300 VDGVTVNCWW GIVEAHAPQE YNWNGYKRLF QMVHELKLKL QVVMSFHECG GNFGDDVCIP 360 LPHWVAEIGR TNPDIFFTDR EGRHNPECLS WGVDKERVLR GRTALEVYFD FMRSFRVEFD 420 EYFEDSFISM IEVGLGPCGE LRYPSCPVKH GWRYPGVGEF QCYDQYMLKS LKKAAEARGH 480 SIWDRGPDNA GTYNSQPHET GFFCDGGDYD GFYGRFFLNW YSKVLVDHGN GVLSLAKLAF 540 EGSCIAAKLA NIYWWYKTAS HAAELTAGYY NPCNRDGYVA IMEMLKSNGV SLNIACADLN 600 TLNQLEVFPK AFADPEGLVW QVLNAGWDLG LPVAGENALP CLNRVTYNKA LDSAKPMNDP 660 DGRHFSSFTY LRLSPLLMEQ QNLREFERFV KRMHGEAVLD LQV

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence Send to blast

MATDMQRLIG TSEDDDEEIE MDVKEEDDED GDEEENGGDH GNASEMVGID GGNGLVTAGG  60
DNSFQQQQQF QEQVGTPGGS ARRCRPLEEK ERTKLRERRR RAITAKILAG LRRHGNYNLR  120
VRADINDVIA ALAREAGWVV LPDGTTFPPR SQGQRPTGGN SAVVTPSSPV PSQPTPSASI  180
RGVASGYRSS LEYNTCQTKG VFMPTPSPYD LSSSSRSQTS MVGDGELQRD NQPLVGSGSM  240
DTVHEKQIID LPCRLSERDL AGTPYVPVYV MLPLGVINIK CELVDPDGLL KQLKVLKSIN  300
VDGVTVNCWW GIVEAHAPQE YNWNGYKRLF QMVHELKLKL QVVMSFHECG GNFGDDVCIP  360
LPHWVAEIGR TNPDIFFTDR EGRHNPECLS WGVDKERVLR GRTALEVYFD FMRSFRVEFD  420
EYFEDSFISM IEVGLGPCGE LRYPSCPVKH GWRYPGVGEF QCYDQYMLKS LKKAAEARGH  480
SIWDRGPDNA GTYNSQPHET GFFCDGGDYD GFYGRFFLNW YSKVLVDHGN GVLSLAKLAF  540
EGSCIAAKLA NIYWWYKTAS HAAELTAGYY NPCNRDGYVA IMEMLKSNGV SLNIACADLN  600
TLNQLEVFPK AFADPEGLVW QVLNAGWDLG LPVAGENALP CLNRVTYNKA LDSAKPMNDP  660
DGRHFSSFTY LRLSPLLMEQ QNLREFERFV KRMHGEAVLD LQV

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1q6d_A	1e-142	265	696	11	444	beta-amylase
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.5ZJ5X

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015037	7e-83	AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016193843.1	0.0	beta-amylase 7 isoform X4
Refseq	XP_025649365.1	0.0	beta-amylase 7 isoform X4
Swissprot	O80831	0.0	BAM7_ARATH; Beta-amylase 7
TrEMBL	A0A444ZM74	0.0	A0A444ZM74_ARAHY; Beta-amylase
STRING	XP_007139874.1	0.0	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF10883	33	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	beta-amylase 7

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]