PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.5ZJ5X
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family BES1
Protein Properties Length: 703aa    MW: 78432.2 Da    PI: 4.9287
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.5ZJ5XgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822143.22.4e-44792181134
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl..eeaeaagssasaspess 93 
                  g+++r ++ +E+E++k+RERrRRai+aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++   +g++p+  ++a ++ ss   s+ ++
  Araip.5ZJ5X  79 GSARRCRPLEEKERTKLRERRRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPprsQGQRPTggNSAVVTPSSPVPSQPTP 176
                  578999***************************************************************98889999997555555555556666565 PP

       DUF822  94 lq.sslkssalaspvesysaspksssfpspssldsislasaa 134
                  +   + ++s  +s +e   +++k + +p ps +d  s++ ++
  Araip.5ZJ5X 177 SAsIRGVASGYRSSLEYNTCQTKGVFMPTPSPYDLSSSSRSQ 218
                  55477889999***********************98776543 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.3E-3981216IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514453.43E-180262699IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.802.3E-195263697IPR013781Glycoside hydrolase, catalytic domain
PfamPF013735.7E-102269689IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.9E-67300314IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.9E-67321339IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.9E-67343364IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.9E-67436458IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.9E-67509528IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.9E-67543559IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.9E-67560571IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.9E-67578601IPR001554Glycoside hydrolase, family 14
PRINTSPR007506.9E-67618640IPR001554Glycoside hydrolase, family 14
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 703 aa     Download sequence    Send to blast
MATDMQRLIG TSEDDDEEIE MDVKEEDDED GDEEENGGDH GNASEMVGID GGNGLVTAGG  60
DNSFQQQQQF QEQVGTPGGS ARRCRPLEEK ERTKLRERRR RAITAKILAG LRRHGNYNLR  120
VRADINDVIA ALAREAGWVV LPDGTTFPPR SQGQRPTGGN SAVVTPSSPV PSQPTPSASI  180
RGVASGYRSS LEYNTCQTKG VFMPTPSPYD LSSSSRSQTS MVGDGELQRD NQPLVGSGSM  240
DTVHEKQIID LPCRLSERDL AGTPYVPVYV MLPLGVINIK CELVDPDGLL KQLKVLKSIN  300
VDGVTVNCWW GIVEAHAPQE YNWNGYKRLF QMVHELKLKL QVVMSFHECG GNFGDDVCIP  360
LPHWVAEIGR TNPDIFFTDR EGRHNPECLS WGVDKERVLR GRTALEVYFD FMRSFRVEFD  420
EYFEDSFISM IEVGLGPCGE LRYPSCPVKH GWRYPGVGEF QCYDQYMLKS LKKAAEARGH  480
SIWDRGPDNA GTYNSQPHET GFFCDGGDYD GFYGRFFLNW YSKVLVDHGN GVLSLAKLAF  540
EGSCIAAKLA NIYWWYKTAS HAAELTAGYY NPCNRDGYVA IMEMLKSNGV SLNIACADLN  600
TLNQLEVFPK AFADPEGLVW QVLNAGWDLG LPVAGENALP CLNRVTYNKA LDSAKPMNDP  660
DGRHFSSFTY LRLSPLLMEQ QNLREFERFV KRMHGEAVLD LQV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1q6d_A1e-14226569611444beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.5ZJ5X
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150377e-83AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016193843.10.0beta-amylase 7 isoform X4
RefseqXP_025649365.10.0beta-amylase 7 isoform X4
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A444ZM740.0A0A444ZM74_ARAHY; Beta-amylase
STRINGXP_007139874.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108833339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]