PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.5PH05

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 156aa MW: 17603.4 Da PI: 4.2938

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.5PH05	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.9	2.7e-07	98	156	2	64
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCka 64 fY+ Y k+ GF ++k+k +++ rn+ +t+++f + g+ ++ ++ +r+++aet++gC+a Araip.5PH05 98 FYSLYTKMNGFAMKKNKIQRNVRNE-VTQQEFGFREMGSVHDGMRR---KREPKAETKCGCEA 156 9*****************97776.***9999999987766...9*********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.5E-4	98	156	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence Send to blast
MEGESAADEC YRPLSAEEEG GDGSNAFGPG GDEFGDEVED GELGVESDAH ENFGDSFFDN 60 WEERAVDGIA ELCINFKEIT TKEIMMCHFS YRSVAFLFYS LYTKMNGFAM KKNKIQRNVR 120 NEVTQQEFGF REMGSVHDGM RRKREPKAET KCGCEA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.5PH05

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016195840.1	3e-94	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444YEF6	1e-108	A0A444YEF6_ARAHY; Uncharacterized protein