PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.59WX5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | FAR1 | ||||||||
Protein Properties | Length: 167aa MW: 18808.2 Da PI: 8.0454 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 51.1 | 4.6e-16 | 61 | 147 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 Y +YA+ +GF vrk + ++k+ + +r+ skegkr+e+ + +++r+++a trtgC+a++ v ++ +++w+v+kl+++Hn +l+p Araip.59WX5 61 LYVRYARCLGFGVRKGDTAREKDGT--QRRR---SKEGKRAEKYISsLSRKREHKALTRTGCEAMFAVYFDTkTSTWRVKKLVEKHNYDLVP 147 7****************99984444..3333...89***999987657889999**************999889**************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 3.5E-14 | 61 | 147 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MDVDSEPLSS QDNVEDGMMI GVEENVNCTC DCGGSSSKCV SVTADDIINQ TFETTDAAYN 60 LYVRYARCLG FGVRKGDTAR EKDGTQRRRS KEGKRAEKYI SSLSRKREHK ALTRTGCEAM 120 FAVYFDTKTS TWRVKKLVEK HNYDLVPQCL VHLIPNHRGL TEAQKAQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.59WX5 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020998497.1 | 1e-108 | protein FAR1-RELATED SEQUENCE 5-like isoform X3 | ||||
TrEMBL | A0A445B7E0 | 1e-104 | A0A445B7E0_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF17979 | 2 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 2e-11 | FAR1 family protein |