PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.4D681
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 401aa    MW: 43813.7 Da    PI: 8.7622
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.4D681genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.11.7e-12189233347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       WT+eE++l++ + ++  +g+W+ I+r   k+Rt+ q+ s+ qky
      Araip.4D681 189 QWTEEEHKLFLVGLQKVRKGDWRGISRNYVKTRTPTQVASHAQKY 233
                      6*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.426182238IPR017930Myb domain
SuperFamilySSF466899.36E-16184238IPR009057Homeodomain-like
TIGRFAMsTIGR015577.5E-15185236IPR006447Myb domain, plants
SMARTSM007171.6E-7186236IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.7E-9188233IPR009057Homeodomain-like
PfamPF002495.3E-10189233IPR001005SANT/Myb domain
CDDcd001671.60E-7190234No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009733Biological Processresponse to auxin
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0046686Biological Processresponse to cadmium ion
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MLFGVRVVVD SMRKSVSMNN LSQYVHPQDE SNNNKDAAFS ATGYASADDA APHNSGKNRE  60
RERKRGVPWT EEEHKLFLYG SSDSASSPTQ LARSKKMCST FAAAADSSIS GDGDSPTAVK  120
IMLFGIRVVV DSMRKSVSMN NLSQYVHPQD DSNNNKDAAF STTGYASTDD AAPHNFGKNR  180
ERERKRGVQW TEEEHKLFLV GLQKVRKGDW RGISRNYVKT RTPTQVASHA QKYFLRRSNL  240
NRRRRRSSLF DITTDSVSSI PMEEEQIQNG DSVPHSQPLC PAAPENSNTN GFPMVPVYPL  300
GVGPGVISSV EAGNPMDELT LGQANMELNA QTKLLHPIPV ASNPKTCTVS DVASGSNSPL  360
DLPTLSLGLS FTSDQRQTPS RHSAFHSIPS LNNGDSVISV A
Functional Description ? help Back to Top
Source Description
UniProtBinds selectively to the DNA sequence 5'-[GA]GATAA-3' and may act as a transcription factor involved in the regulation of drought-responsive genes. Enhances stomatal closure in response to abscisic acid (ABA). Confers drought and salt tolerance. {ECO:0000269|PubMed:21030505}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00631PBMTransfer from PK23829.1Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.4D681
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, high salinity, and ABA. {ECO:0000269|PubMed:21030505}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF2086680.0KF208668.1 Arachis hypogaea putative MYB-related protein 14 (MYB14) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016169474.10.0LOW QUALITY PROTEIN: transcription factor MYB1R1-like
SwissprotQ2V9B01e-66MY1R1_SOLTU; Transcription factor MYB1R1
TrEMBLA0A444XY950.0A0A444XY95_ARAHY; Uncharacterized protein
STRINGXP_007155372.11e-126(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42483154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.21e-48MYB_related family protein
Publications ? help Back to Top
  1. Shin D, et al.
    Expression of StMYB1R-1, a novel potato single MYB-like domain transcription factor, increases drought tolerance.
    Plant Physiol., 2011. 155(1): p. 421-32
    [PMID:21030505]