 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Araip.45RHI |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
B3 |
| Protein Properties |
Length: 348aa MW: 39962.2 Da PI: 6.6911 |
| Description |
B3 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Araip.45RHI | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | B3 | 101.9 | 3.5e-32 | 89 | 198 | 1 | 100 |
EEEE-..-HHHHTT-EE--HHH.HTT..........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88
f+k ltpsdv+k++rlv+pk++ae++ + + ++ l++edesg+ W+++++y+++s++yvltkGW+++vk+++L++gD+v F++++ +
Araip.45RHI 89 FEKPLTPSDVGKLNRLVIPKQHAEKYfpltassateSATECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVSFERHRAD 186
99***************************9988876444448889************************************************98889 PP
EE..EEEEE-SS CS
B3 89 efelvvkvfrks 100
+++l+++++r+s
Araip.45RHI 187 SQRLFIRWRRRS 198
999******985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0080113 | Biological Process | regulation of seed growth |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MSINHYSSSP MDLQETTPLW WTQQPQPPSS YNNNIHNSQN TPRFNLNNEE TDTATTSQEG 60
DEEEEEENLP EPIQQDDNNN HQQHNERMFE KPLTPSDVGK LNRLVIPKQH AEKYFPLTAS 120
SATESATECK GLLLSFEDES GKCWRFRYSY WNSSQSYVLT KGWSRYVKDK RLDAGDVVSF 180
ERHRADSQRL FIRWRRRSSP LAQVSRTAHA GGADVNNDKS GVAWTSGFYC AHPPYPAHPL 240
HNQHLTYPQQ HEGSSSSLHA GSQGKNQRMR PVGNCSSSSS KVLRLFGVNM ECQTQHDDDD 300
SQPSTTKEGT SNSDTTHHFY HHNYYHQPSN NSHPNHNHML PHQQSYYY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5os9_A | 1e-50 | 86 | 197 | 5 | 113 | B3 domain-containing transcription factor NGA1 |
| 5os9_B | 1e-50 | 86 | 197 | 5 | 113 | B3 domain-containing transcription factor NGA1 |
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