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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Araip.3K50N |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family |
Trihelix |
Protein Properties |
Length: 480aa MW: 55491.8 Da PI: 7.5893 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Araip.3K50N | genome | NCGR_PGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 93.2 | 2.7e-29 | 45 | 129 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+++e++aLi++r+em+ ++r+ + k+plWe+vs+k+ e g+ers+k+Ckek+en+ k+++++keg++++ ++ +t+++fdqlea
Araip.3K50N 45 RWPREETMALIKIRSEMDGAFRDISPKAPLWEQVSRKLGELGYERSAKKCKEKFENIYKYHRRTKEGRSGK--RNGKTYRFFDQLEA 129
8********************************************************************96..55567*******85 PP
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2 | trihelix | 100 | 2e-31 | 319 | 405 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k+ev aLi++r++++e+l++++ k+plWeevs +m+ g+ rs+k+Ckekwen+nk++k++ke +k++ +e+s+tcpy+++lea
Araip.3K50N 319 RWPKDEVEALIRLRTQVDEQLQQQQgNKGPLWEEVSTAMKGLGYDRSAKRCKEKWENINKYFKRMKEKNKRK-PEDSKTCPYYHHLEA 405
8*********************8543899*****************************************96.9***********985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 480 aa
Download sequence Send
to blast |
MENSTLPENS IENRKVAVAA AEGDSVSSDG LKGEDGERNS SGANRWPREE TMALIKIRSE 60 MDGAFRDISP KAPLWEQVSR KLGELGYERS AKKCKEKFEN IYKYHRRTKE GRSGKRNGKT 120 YRFFDQLEAL DPHPNNNAVI QDAVPCSVRF PVTAMEHSSS ATSSYSSGGG EDEGEGRRRK 180 KKRRLRVFFE GLMREVLEKQ ESLQKKFMEV LDKCDQDRMA REQAWKTEEL ARIKKERELL 240 AQERSIAAAK DEAVMSFIRK FAENSNNNGA LQFPADNNNH LQEQEKEKEK EKEKEKEKEK 300 DEVGNGINVG NFVHMSSSRW PKDEVEALIR LRTQVDEQLQ QQQGNKGPLW EEVSTAMKGL 360 GYDRSAKRCK EKWENINKYF KRMKEKNKRK PEDSKTCPYY HHLEAIYSKK PKNNNKLDDN 420 DNDKKNELKP EELLMHIMNG QEERQQDPDQ DQSSSEDADR DNHNGYQMLD NSPSSIPIMS
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 175 | 184 | GRRRKKKRRL |
2 | 177 | 182 | RRKKKR |
3 | 177 | 183 | RRKKKRR |
4 | 177 | 184 | RRKKKRRL |
5 | 179 | 183 | KKKRR |
6 | 179 | 184 | KKKRRL |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |