PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.3F7N8
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 807aa    MW: 87786.2 Da    PI: 6.2922
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.3F7N8genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.21.8e-20122177156
                  TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  Araip.3F7N8 122 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 177
                  688999***********************************************999 PP
2START219.51.1e-683165361206
                  HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
        START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                  ela +a++el+ +a+ +ep+W +      + +n+de++++f+++ +     ++ ea+r+++vv+m++++lve+l+d++ qW++ +     +a tlev+
  Araip.3F7N8 316 ELAVAAMEELIGMAQMGEPLWLTTLdgatTVLNEDEYVRSFPRGIGpkpngFKCEASRETAVVIMNHVNLVEILMDVN-QWSTVFSgivsRAVTLEVL 412
                  57899********************999999************999********************************.******************* PP

                  CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSX CS
        START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrl 176
                  s+g      galq+m+aelq++splvp R+++fvRy++q+ +g+w++vdvS+d+ ++ p    ++R++++pSg+li++++ng+skv+wvehv++++r 
  Araip.3F7N8 413 STGvagnynGALQVMTAELQVPSPLVPtRESYFVRYCKQHADGTWAVVDVSLDNLRPSP----SARCRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRG 506
                  *********************************************************99....5********************************** PP

                  XHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
        START 177 phwllrslvksglaegaktwvatlqrqcek 206
                  +h+l+++lv+sg+a+gak+w atl+rqce+
  Araip.3F7N8 507 VHSLYKQLVSSGHAFGAKRWIATLDRQCER 536
                  ****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.4E-23101177IPR009057Homeodomain-like
SuperFamilySSF466891.88E-19111179IPR009057Homeodomain-like
PROSITE profilePS5007116.925119179IPR001356Homeobox domain
SMARTSM003891.2E-19120183IPR001356Homeobox domain
PfamPF000464.6E-18122177IPR001356Homeobox domain
CDDcd000863.01E-19122180No hitNo description
PROSITE patternPS000270154177IPR017970Homeobox, conserved site
SuperFamilySSF559614.4E-35307538No hitNo description
PROSITE profilePS5084844.378307539IPR002913START domain
CDDcd088752.34E-130311535No hitNo description
SMARTSM002341.2E-61316536IPR002913START domain
PfamPF018523.0E-57317536IPR002913START domain
Gene3DG3DSA:3.30.530.202.2E-5407530IPR023393START-like domain
SuperFamilySSF559611.43E-16555798No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010090Biological Processtrichome morphogenesis
GO:0048497Biological Processmaintenance of floral organ identity
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 807 aa     Download sequence    Send to blast
MPAGIMIPAR NMMSSMIGRT NNGNSLGGGF GSSSSSGLSL GQIENHNKGS ETHHQRSMDM  60
FQANMMEGGQ LHHHGLEMGQ NTPESDVPRI REDEFDSATK SGSENQEGGA SGEDQDPRPN  120
KKKRYHRHTQ HQIQEMEAFF KECPHPDDKQ RKELSRELGL EPLQVKFWFQ NKRTQMKTQH  180
ERHENTQLRT ENEKLRADNM RYREALSNAS CPNCGGPTAI GEMSFDEHHL RLENARLREE  240
IDRISAIAAK YVGKPVVNYP LLSSSSVPAR PLELGIGGFG GQAGMGGGDM YGGGGAGDLL  300
RPISGPTEAD KPMIIELAVA AMEELIGMAQ MGEPLWLTTL DGATTVLNED EYVRSFPRGI  360
GPKPNGFKCE ASRETAVVIM NHVNLVEILM DVNQWSTVFS GIVSRAVTLE VLSTGVAGNY  420
NGALQVMTAE LQVPSPLVPT RESYFVRYCK QHADGTWAVV DVSLDNLRPS PSARCRRRPS  480
GCLIQEMPNG YSKVIWVEHV EVDDRGVHSL YKQLVSSGHA FGAKRWIATL DRQCERLASA  540
MATNIPTVDV GVITNQEGRK SMLKLAERMV ISFCAGVSAS TAHTWTTLSG TGADDVRVMT  600
RKSVDDPGRP PGIVLSAATS FWLPVPPKRV FEFLRDENSR SEVTVFNYQI EFKSFFYSSI  660
FIFGKIKQWD ILSNGGVVQE MAHIANGRDT GNCVSLLRVN SCTDSTGSFV IYAPVDIVAM  720
NVVLNGGDPD YVALLPSGFA ILPDGTTPDG GSEAGGHGGS LLTVAFQILV DSVPTAKLSL  780
GSVATVNNLI ACTVERIKAS LSGEAPS
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.3F7N8
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015936068.10.0homeobox-leucine zipper protein HDG2 isoform X1
RefseqXP_016171082.10.0homeobox-leucine zipper protein HDG2 isoform X2
RefseqXP_025614340.10.0homeobox-leucine zipper protein HDG2 isoform X1
RefseqXP_025671859.10.0homeobox-leucine zipper protein HDG2 isoform X2
SwissprotQ94C370.0HDG2_ARATH; Homeobox-leucine zipper protein HDG2
TrEMBLA0A444Y6S90.0A0A444Y6S9_ARAHY; Uncharacterized protein
STRINGGLYMA12G32050.30.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15083499
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0homeodomain GLABROUS 2