PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.2MX8B
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 178aa    MW: 20340.7 Da    PI: 9.0339
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.2MX8BgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.52.4e-09108174170
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkk 70 
                  +fY +YAk+v F  ++++++  k+ +e +++   C+ +g+  ++ k+     r++++  +gCka++  k 
  Araip.2MX8B 108 DFYASYAKKVSFISKIHNTNFDKMIKELINQSIHCNWKGFCGSRVKA---PTRKNTVAAVGCKARIYTKF 174
                  6*******************************************999...8889999********98875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.6E-6108175IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MRGKVVASIS YERDLSQPLQ WSPICLKWVV MPQLPSPTTI PHIQVTIFSI LATWKVKKSN  60
KAIECTDITE FGSDDTDLVD ELPDHSCLVE DEIPRVGMQF EKLKLVQDFY ASYAKKVSFI  120
SKIHNTNFDK MIKELINQSI HCNWKGFCGS RVKAPTRKNT VAAVGCKARI YTKFDREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.2MX8B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020977060.11e-107protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZP821e-106A0A444ZP82_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14126217
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.18e-07FAR1 family protein