PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.29WB6
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family S1Fa-like
Protein Properties Length: 719aa    MW: 77454.3 Da    PI: 8.4113
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.29WB6genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA22.52.3e-07313347741
         S1FA   7 eakGlnPGlivllvvgglllvflvgnyilyvyaqk 41 
                    kGl PGlivl+ v+    v l+g  i+yvy +k
  Araip.29WB6 313 SNKGLSPGLIVLISVADAAGVALIGLIIVYVYWKK 347
                  56******************************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF082633.2E-102767IPR013210Leucine-rich repeat-containing N-terminal, plant-type
Gene3DG3DSA:3.80.10.102.2E-5829281IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520583.69E-4929287IPR032675Leucine-rich repeat domain, L domain-like
PROSITE profilePS514504.986100122IPR001611Leucine-rich repeat
PROSITE profilePS514506.449124146IPR001611Leucine-rich repeat
PfamPF138553.3E-8124183IPR001611Leucine-rich repeat
PROSITE profilePS514507.003148170IPR001611Leucine-rich repeat
PROSITE profilePS514504.909197219IPR001611Leucine-rich repeat
PROSITE profilePS514504.986221245IPR001611Leucine-rich repeat
PfamPF046891.7E-4313347IPR006779DNA binding protein S1FA
PROSITE profilePS5001132.414422717IPR000719Protein kinase domain
SMARTSM002202.4E-12426717IPR000719Protein kinase domain
PfamPF000691.9E-32427646IPR000719Protein kinase domain
SuperFamilySSF561127.01E-59427714IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.202.0E-14428484No hitNo description
CDDcd140661.12E-89428717No hitNo description
Gene3DG3DSA:1.10.510.102.0E-33485710No hitNo description
PROSITE patternPS001080545557IPR008271Serine/threonine-protein kinase, active site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0005634Cellular Componentnucleus
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    Send to blast
MSVNLFLCFF SFSFFFIFSI QTVFSLSPDG VALLTLKSAV DPAGAAALAN WNDGDATPCG  60
WSGVSCSNIS GDPDPRVVGV SLAGRGLRGY LPSELGTLLY LRRLNLHSNA FRGSIPSQLF  120
NATALRSLYL HSNNLSGDLP PSLFSLRRLQ NLDLSDNSLS GSIPNSLRNC SQLQRLVLAR  180
NKFSGKIPAT PWPELRELIQ LDLSANLLEG PIPDQIGELQ SLTGTLNLSF NHLSGNVPES  240
LGKLPVTVSF DLRNNNLSGE IPQTGSFSNQ GPTAFLNNPN LCGFPLQKPC SGSARSEPGS  300
SPGPKRERSG SRSNKGLSPG LIVLISVADA AGVALIGLII VYVYWKKKDG CNGCSCTGKA  360
KFGGGENGKT RFCCSLPCMN VGVLKSDDSE LEEGEKGEGG RGEGELVAID KGFNFELDEL  420
LRASAYVLGK SGLGIVYKVV LGNGVPVAVR RLGEGGEQRY KEFAAEVQAI GKVKHPNVVK  480
LRAYYWAPDE KLLISDFISN GNLTTALRGR NGQPTMNLPW STRLRIAKGA ARGLAYLHEC  540
SPRKFVHGDI KPSNILLDGD FQPRISDFGL NRLISITGNN PSNGGFMGGA LPYFKPSQTE  600
HTNNYKAPEA KVPGSRPTQK WDVYSFGVVL LELLTGKSPD STPAPSTSME VPDMVRWVRK  660
GFEQESPLSE MVDPPLLQEV HAKKEVLAVF HVALSCTEGD PEVRPRMKTV SENLEKIGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4q5j_A1e-4642771749319Protein BRASSINOSTEROID INSENSITIVE 1
4q5j_B1e-4642771749319Protein BRASSINOSTEROID INSENSITIVE 1
5lpb_A7e-4742771724294Protein BRASSINOSTEROID INSENSITIVE 1
5lpv_A7e-4742771724294Protein BRASSINOSTEROID INSENSITIVE 1
5lpw_A7e-4742771724294Protein BRASSINOSTEROID INSENSITIVE 1
5lpy_A7e-4742771724294Protein BRASSINOSTEROID INSENSITIVE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.29WB6
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016198710.10.0receptor protein kinase-like protein ZAR1
RefseqXP_025648815.10.0receptor protein kinase-like protein ZAR1
TrEMBLA0A444ZK550.0A0A444ZK55_ARAHY; Uncharacterized protein
STRINGGLYMA07G19200.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF540055
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12020.29e-11WRKY family protein