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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Araip.29KUE |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
HSF |
| Protein Properties |
Length: 465aa MW: 52494.6 Da PI: 6.803 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Araip.29KUE | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 111.4 | 6.2e-35 | 73 | 165 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98
Fl+k++++++d++l+ +isw ++g sfvv+d+ ef++ vLp+ Fkh+nf+SFvRQLn+YgF+k+++++ weF ++ F++gkk+ll++i+
Araip.29KUE 73 FLSKTFDLVDDPSLDPIISWGSTGASFVVWDPMEFSRLVLPRNFKHNNFSSFVRQLNTYGFRKIDTDK---------WEFFNEAFQRGKKHLLKNIQ 160
9****************************************************************999.........******************** PP
XXXXX CS
HSF_DNA-bind 99 rkkse 103
r++s+
Araip.29KUE 161 RRRST 165
**986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009408 | Biological Process | response to heat |
| GO:0010200 | Biological Process | response to chitin |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 465 aa
Download sequence Send
to blast |
MALLCHRHRR SSTPTPTVAT FHRLSTLLRF HSNPPSPFRS PSTPIHPSHI TTQNQFQPIT 60
PLECLHGNPV PPFLSKTFDL VDDPSLDPII SWGSTGASFV VWDPMEFSRL VLPRNFKHNN 120
FSSFVRQLNT YGFRKIDTDK WEFFNEAFQR GKKHLLKNIQ RRRSTQSQQV GSYIGTSTDA 180
GRPGLEVEIE LLRKERSMLM QEVVDLQQQQ RRTVHHAGEV NQRLESAEQR QKQMVSFLAK 240
LFQNPAFLAR LRDKKEQRQI ESPKARRKFI KHQHEAGNSE TPKGQVVRYQ PDWRNRTVSS 300
ETPELNPVSF EQSPQYLSQD LAREISVGAE NLTSQLDKIV SDELDALHEA MPTLGIVGEG 360
SSSYGLEDPL SKGKNAFNPS QDVLSEYFED AWDPAFNASV AASSCGNELW GNPVNHVVPE 420
FGGTSGVSDI WDIGSGSLGI DKWPADESPM DKKESQGGQP EDDRP
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 248 | 256 | ARLRDKKEQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). Involved in heat stress response. Activated by DREB2A under heat stress. {ECO:0000269|PubMed:17999647, ECO:0000269|PubMed:18261981}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By heat stress. {ECO:0000269|PubMed:17999647, ECO:0000269|PubMed:18261981}. |
| Publications
? help Back to Top |
- Jung HS, et al.
Subset of heat-shock transcription factors required for the early response of Arabidopsis to excess light.
Proc. Natl. Acad. Sci. U.S.A., 2013. 110(35): p. 14474-9
[PMID:23918368] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Nie S,Yue H,Xing D
A Potential Role for Mitochondrial Produced Reactive Oxygen Species in Salicylic Acid-Mediated Plant Acquired Thermotolerance.
Plant Physiol., 2016.
[PMID:26099269] - Hu Z, et al.
Histone acetyltransferase GCN5 is essential for heat stress-responsive gene activation and thermotolerance in Arabidopsis.
Plant J., 2015. 84(6): p. 1178-91
[PMID:26576681] - Song C,Chung WS,Lim CO
Overexpression of Heat Shock Factor Gene HsfA3 Increases Galactinol Levels and Oxidative Stress Tolerance in Arabidopsis.
Mol. Cells, 2016. 39(6): p. 477-83
[PMID:27109422] - Kim GD,Cho YH,Lee BH,Yoo SD
STABILIZED1 Modulates Pre-mRNA Splicing for Thermotolerance.
Plant Physiol., 2017. 173(4): p. 2370-2382
[PMID:28223317] - Song C,Lee J,Kim T,Hong JC,Lim CO
VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
Planta, 2018. 247(6): p. 1439-1448
[PMID:29536220]
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