PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.1E1WQ
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 362aa    MW: 40864.6 Da    PI: 4.7351
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.1E1WQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.79.9e-28122183159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK++  ++fpr+YYrCt++   gC ++k+v+rs+ dp+++e+ Y+g+H+++
  Araip.1E1WQ 122 LDDGYSWRKYGQKDILRAKFPRGYYRCTYRnvqGCLATKQVQRSDVDPTMIEVNYRGRHTCT 183
                  59***************************98989**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-26111184IPR003657WRKY domain
PROSITE profilePS5081121.746117180IPR003657WRKY domain
SuperFamilySSF1182907.19E-24121184IPR003657WRKY domain
SMARTSM007744.2E-38122184IPR003657WRKY domain
PfamPF031063.7E-25123182IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009751Biological Processresponse to salicylic acid
GO:0010193Biological Processresponse to ozone
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MEYTENGEHG LINELIQGKE LAKQLCNLLS SSSSSSSKEI LIDKILSTYE KALTMLNSDS  60
TITNLINSHS SSSSINGSPS RSDLIDNDEE FKDKPPLKKR KTMPKWTEKV KVCSKTGLEG  120
SLDDGYSWRK YGQKDILRAK FPRGYYRCTY RNVQGCLATK QVQRSDVDPT MIEVNYRGRH  180
TCTQSKHSNK AFPSKTMLPV LEKNQFHKFQ NNQPQKQEKM EQTQEEIFNF EPKLELDTNT  240
NITTKDDDIF PWFCYLSPSM GSENGDNDML LSDSMFLESF SSDIASFISP STSESDLFCL  300
SPCQFGSSNN NGIVQSSESD ITEILSTPTS VTNSPIMDFD MLLDKVDFDT IFPSNTTEYS  360
SS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-191211801374Disease resistance protein RRS1
5w3x_D2e-191211801374Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00525DAPTransfer from AT5G24110Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.1E1WQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016205279.10.0probable WRKY transcription factor 30
RefseqXP_025662887.10.0probable WRKY transcription factor 30
TrEMBLA0A444YL470.0A0A444YL47_ARAHY; Uncharacterized protein
STRINGGLYMA19G44380.11e-133(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.17e-44WRKY family protein