PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.0S602
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 94aa    MW: 10756.1 Da    PI: 5.7101
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.0S602genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-0817601455
                 HHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
          HLH 14 driNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                 ++iN+  ++L+ llP+ + ++++ + +s  eiL++++ +Ik Lq
  Araip.0S602 17 NEINDLASRLQALLPQpNQQTRNSRqVSVLEILKETCSHIKRLQ 60
                 58**************6668888888*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.042359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-81763IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-71776IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.7E-61760IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    Send to blast
MSGRRQRSSG RSEFTENEIN DLASRLQALL PQPNQQTRNS RQVSVLEILK ETCSHIKRLQ  60
KDVEDLSETL TGLLDSLHIT DIDITLLQDL LQQK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.0S602
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020969371.19e-61transcription factor ILI4-like isoform X1
TrEMBLA0A371HS695e-26A0A371HS69_MUCPR; Transcription factor ILI7 (Fragment)
STRINGGLYMA08G47171.12e-26(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106242439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.16e-11activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1