PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.0A72E
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 464aa    MW: 52672.9 Da    PI: 8.4102
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.0A72EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B361.31.6e-19106195198
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  f+k l++s+v +  ++ lp  f+++h  +  +++t+tlede g+++++k+i +k++    l++GW++F   ++L+egD++vF+l++  +f  ++ ++r
  Araip.0A72E 106 FVKSLVRSHVASCFWMGLPVAFCKKHLAD--KDTTMTLEDEYGKEYKMKYIACKTG----LSAGWRQFSAVHKLQEGDVLVFQLVEPAKF--KIYIVR 195
                  89************************656..5679***************777776....***********************9875555..776666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.105.9E-2197197IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.94E-2399197IPR015300DNA-binding pseudobarrel domain
CDDcd100177.28E-26104195No hitNo description
PfamPF023626.1E-17106195IPR003340B3 DNA binding domain
PROSITE profilePS5086313.507106197IPR003340B3 DNA binding domain
SMARTSM010195.0E-24106197IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MVDRMVKKEV EQHDEQTVTL GFYGDEQAQR RFSINMMDKQ NKATDNKNKV LNSDIKPVTN  60
GEAQKFASSM KGTTAEATSS RGEAKSSAVI RAEEIRSSLQ AEYPSFVKSL VRSHVASCFW  120
MGLPVAFCKK HLADKDTTMT LEDEYGKEYK MKYIACKTGL SAGWRQFSAV HKLQEGDVLV  180
FQLVEPAKFK IYIVRADNLR EVDGALSLMN LDIASLVFSE KENPENDALD ASITKRKPGK  240
SVAIDVQKKK PSKPGHKSVQ PAQSENDSEE ALSEVFEGFR TLDFKDVKGF ENFSIIVDGV  300
VLDAEFSNEV RNKYYKLCYS QRAFLHDNLT RGLNYKLVVG IITETVNIAD AIKVSVLATP  360
RFDFSNWDKT LLAFEHMGMN VEFLRVKLRR LVSIAYETDD ALETRRYFQY KNQHSRADAE  420
IKNMESKLED LKGACKDFSA YIKSLKQKAE THQNKFQKEV ASPW
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.0A72E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020974044.10.0B3 domain-containing protein Os01g0234100-like isoform X1
RefseqXP_025627203.10.0B3 domain-containing protein Os01g0234100-like
TrEMBLA0A445AQ670.0A0A445AQ67_ARAHY; Uncharacterized protein
STRINGGLYMA17G20175.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF10073398
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-35B3 family protein