PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.066L2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | TALE | ||||||||
Protein Properties | Length: 554aa MW: 60271.3 Da PI: 8.1987 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29 | 1.8e-09 | 403 | 440 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + Araip.066L2 403 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 440 664559******************************88 PP | |||||||
2 | BELL | 96.9 | 1.7e-31 | 277 | 334 | 15 | 72 |
BELL 15 lleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 l Vd+rY++y+eq+q+v++sF++v+g+g+a pYt+lA+ka+SrhFrcLkdai+ q+ Araip.066L2 277 LTRHVDRRYNHYCEQMQMVVNSFDVVMGYGAAVPYTALAQKAMSRHFRCLKDAITTQL 334 5678***************************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 1.1E-43 | 227 | 332 | IPR006563 | POX domain |
Pfam | PF07526 | 2.3E-6 | 232 | 259 | IPR006563 | POX domain |
Pfam | PF07526 | 1.2E-26 | 277 | 331 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.568 | 381 | 444 | IPR001356 | Homeobox domain |
SMART | SM00389 | 1.2E-9 | 384 | 448 | IPR001356 | Homeobox domain |
CDD | cd00086 | 3.75E-13 | 384 | 445 | No hit | No description |
SuperFamily | SSF46689 | 3.25E-17 | 385 | 450 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.5E-28 | 387 | 448 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 2.6E-18 | 401 | 440 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 554 aa Download sequence Send to blast |
MLSEMFNFPA TELLEQQHHH FRSPSSSRPQ PPENWYGSRQ GMIATTTTGF GGDSKQQISS 60 INADSAAAMH LFLMNPAQRR SPSPPPSATS STLHMLLPNH SSNSLQGFPP AGSAGGSFGQ 120 FTWVPDSGAG HEGAANNPAA APPGHHEINV VEGQGLSLSL SSSLQHLEAA KAEELRMGEG 180 GFLFYNQGGG AAASNSGHFP YKNHLQGGMV GQGHLAGFAS ASSSSSLGVV HVLRNSKYVK 240 AAQELLEEFC SVGRGHFKKN KFRLSIREGR SNFYQCLTRH VDRRYNHYCE QMQMVVNSFD 300 VVMGYGAAVP YTALAQKAMS RHFRCLKDAI TTQLKHSCEV LGEKEGAGGS GLTKGETPRL 360 KMLEQSLRQQ RAFQQMGMME QEAWRPQRGL PERSVNILRA WLFEHFLHPY PSDADKHLLA 420 RQTGLSRNQV SNWFINARVR LWKPMVEEIN GGQQQAQNPS TTSGGESEIQ VEGFSENQEG 480 GSNSIMVAQG GMASEMMPPQ QSQRSMASDD TCRHGSYVAG AEYGTAFGTT AGDVSLTLGL 540 RHAGNVPRQN PFFS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 5e-17 | 390 | 450 | 5 | 65 | Homeobox protein Meis2 |
3k2a_B | 5e-17 | 390 | 450 | 5 | 65 | Homeobox protein Meis2 |
4xrs_A | 4e-17 | 390 | 447 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 4e-17 | 390 | 447 | 1 | 58 | Homeobox protein Meis1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression. {ECO:0000269|PubMed:17873098}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.066L2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016199137.2 | 0.0 | BEL1-like homeodomain protein 2 | ||||
Refseq | XP_020978640.1 | 0.0 | BEL1-like homeodomain protein 2 | ||||
Refseq | XP_020978641.1 | 0.0 | BEL1-like homeodomain protein 2 | ||||
Refseq | XP_020978642.1 | 0.0 | BEL1-like homeodomain protein 2 | ||||
Refseq | XP_020978643.1 | 0.0 | BEL1-like homeodomain protein 2 | ||||
Swissprot | Q94KL5 | 1e-128 | BLH4_ARATH; BEL1-like homeodomain protein 4 | ||||
TrEMBL | A0A444WSL3 | 0.0 | A0A444WSL3_ARAHY; Uncharacterized protein | ||||
STRING | POPTR_0007s12170.2 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3524 | 32 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23760.3 | 1e-127 | BEL1-like homeodomain 4 |
Publications ? help Back to Top | |||
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