PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.007DK
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 216aa    MW: 23905.9 Da    PI: 10.2157
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.007DKgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.33.3e-1458104455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   h ++Er+RR++i ++f  L   +P++     kK +Ka+iL +A+ YIk+L+
  Araip.007DK  58 DHIMAERKRRQEITQKFIALSATIPHL-----KKIDKASILSEAIAYIKQLK 104
                  699************************.....9*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.45654103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.84E-1659121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.8E-1759119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-1159103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.69E-1159108No hitNo description
SMARTSM003531.3E-1360109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
DNEAGNNGGG VVQEVGERLS LPKLMMMMMM SKSNSSKSIV NGGNIAKKAR RSSSECLDHI  60
MAERKRRQEI TQKFIALSAT IPHLKKIDKA SILSEAIAYI KQLKEQGKKL EEESRKKNRT  120
VIESVSLVNK RHGAYELVEA RALEKQVLIR IHCHGHKGVP QVFNHLTNLD LSVVSTSVLP  180
FGTCALDITI VAQMGEKYSA SMKDLVQSLR LAIPLC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16267ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.007DK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020967272.11e-139transcription factor bHLH18
TrEMBLA0A445CIP41e-117A0A445CIP4_ARAHY; Uncharacterized protein
STRINGGLYMA07G03051.13e-53(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2379533
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.12e-27bHLH family protein